Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PAF1Q8N7H5 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
PAF1Q8N7H5 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PAF1Q8N7H5 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC22.6■■□□□ 1.21
PAF1Q8N7H5 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PAF1Q8N7H5 AC144652.1-201ENST00000609974 1624 ntBASIC22.6■■□□□ 1.21
PAF1Q8N7H5 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PAF1Q8N7H5 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PAF1Q8N7H5 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PAF1Q8N7H5 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC22.59■■□□□ 1.21
PAF1Q8N7H5 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC22.59■■□□□ 1.21
PAF1Q8N7H5 AC138932.1-201ENST00000534164 6830 ntBASIC22.59■■□□□ 1.21
PAF1Q8N7H5 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PAF1Q8N7H5 THRA-202ENST00000394121 2260 ntTSL 2 BASIC22.59■■□□□ 1.21
PAF1Q8N7H5 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
PAF1Q8N7H5 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
PAF1Q8N7H5 ASB1-202ENST00000409297 878 ntTSL 5 BASIC22.59■■□□□ 1.21
PAF1Q8N7H5 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
PAF1Q8N7H5 VGF-203ENST00000611537 1622 ntTSL 5 BASIC22.59■■□□□ 1.21
PAF1Q8N7H5 AC079630.1-202ENST00000618127 1840 ntBASIC22.59■■□□□ 1.21
PAF1Q8N7H5 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PAF1Q8N7H5 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC22.58■■□□□ 1.21
PAF1Q8N7H5 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
PAF1Q8N7H5 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PAF1Q8N7H5 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
PAF1Q8N7H5 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PAF1Q8N7H5 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC22.58■■□□□ 1.21
PAF1Q8N7H5 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PAF1Q8N7H5 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
PAF1Q8N7H5 UNC93B3-201ENST00000308076 687 ntBASIC22.58■■□□□ 1.21
PAF1Q8N7H5 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
PAF1Q8N7H5 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
PAF1Q8N7H5 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC22.58■■□□□ 1.2
PAF1Q8N7H5 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PAF1Q8N7H5 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
PAF1Q8N7H5 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PAF1Q8N7H5 LINC01529-204ENST00000636474 1715 ntBASIC22.57■■□□□ 1.2
PAF1Q8N7H5 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PAF1Q8N7H5 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC22.57■■□□□ 1.2
PAF1Q8N7H5 PTCHD3P2-201ENST00000424937 1205 ntBASIC22.57■■□□□ 1.2
PAF1Q8N7H5 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
PAF1Q8N7H5 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC22.57■■□□□ 1.2
PAF1Q8N7H5 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PAF1Q8N7H5 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
PAF1Q8N7H5 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC22.57■■□□□ 1.2
PAF1Q8N7H5 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PAF1Q8N7H5 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC22.57■■□□□ 1.2
PAF1Q8N7H5 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
PAF1Q8N7H5 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PAF1Q8N7H5 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
PAF1Q8N7H5 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
PAF1Q8N7H5 PBX2P1-201ENST00000493219 1291 ntBASIC22.56■■□□□ 1.2
PAF1Q8N7H5 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PAF1Q8N7H5 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC22.56■■□□□ 1.2
PAF1Q8N7H5 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PAF1Q8N7H5 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC22.56■■□□□ 1.2
PAF1Q8N7H5 AL136162.1-201ENST00000607711 1078 ntBASIC22.56■■□□□ 1.2
PAF1Q8N7H5 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PAF1Q8N7H5 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PAF1Q8N7H5 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PAF1Q8N7H5 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PAF1Q8N7H5 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PAF1Q8N7H5 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
PAF1Q8N7H5 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
PAF1Q8N7H5 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
PAF1Q8N7H5 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PAF1Q8N7H5 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PAF1Q8N7H5 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PAF1Q8N7H5 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PAF1Q8N7H5 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
PAF1Q8N7H5 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
PAF1Q8N7H5 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PAF1Q8N7H5 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
PAF1Q8N7H5 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PAF1Q8N7H5 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC22.55■■□□□ 1.2
PAF1Q8N7H5 AC006455.2-201ENST00000429931 906 ntBASIC22.55■■□□□ 1.2
PAF1Q8N7H5 pRNA.6-201ENST00000610482 90 ntBASIC22.55■■□□□ 1.2
PAF1Q8N7H5 pRNA.5-201ENST00000612139 90 ntBASIC22.55■■□□□ 1.2
PAF1Q8N7H5 pRNA.11-201ENST00000618423 90 ntBASIC22.55■■□□□ 1.2
PAF1Q8N7H5 pRNA.13-201ENST00000619112 90 ntBASIC22.55■■□□□ 1.2
PAF1Q8N7H5 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PAF1Q8N7H5 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
PAF1Q8N7H5 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
PAF1Q8N7H5 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC22.54■■□□□ 1.2
PAF1Q8N7H5 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
PAF1Q8N7H5 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC22.54■■□□□ 1.2
PAF1Q8N7H5 FP325331.1-202ENST00000623531 1380 ntBASIC22.54■■□□□ 1.2
PAF1Q8N7H5 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PAF1Q8N7H5 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC22.54■■□□□ 1.2
PAF1Q8N7H5 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
PAF1Q8N7H5 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC22.54■■□□□ 1.2
PAF1Q8N7H5 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PAF1Q8N7H5 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PAF1Q8N7H5 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
PAF1Q8N7H5 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC22.53■■□□□ 1.2
PAF1Q8N7H5 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PAF1Q8N7H5 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
PAF1Q8N7H5 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
PAF1Q8N7H5 ANOS2P-203ENST00000472227 1816 ntBASIC22.53■■□□□ 1.2
PAF1Q8N7H5 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms