Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.24■□□□□ 0.67
CHRFAM7AQ494W8 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHRFAM7AQ494W8 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHRFAM7AQ494W8 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHRFAM7AQ494W8 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CHRFAM7AQ494W8 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CHRFAM7AQ494W8 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHRFAM7AQ494W8 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHRFAM7AQ494W8 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CHRFAM7AQ494W8 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.23■□□□□ 0.67
CHRFAM7AQ494W8 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.23■□□□□ 0.67
CHRFAM7AQ494W8 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHRFAM7AQ494W8 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHRFAM7AQ494W8 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHRFAM7AQ494W8 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHRFAM7AQ494W8 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CHRFAM7AQ494W8 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHRFAM7AQ494W8 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CHRFAM7AQ494W8 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHRFAM7AQ494W8 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.22■□□□□ 0.67
CHRFAM7AQ494W8 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
CHRFAM7AQ494W8 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.22■□□□□ 0.67
CHRFAM7AQ494W8 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.22■□□□□ 0.67
CHRFAM7AQ494W8 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.22■□□□□ 0.67
CHRFAM7AQ494W8 AL031432.3-201ENST00000607698 485 ntBASIC19.22■□□□□ 0.67
CHRFAM7AQ494W8 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CHRFAM7AQ494W8 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHRFAM7AQ494W8 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHRFAM7AQ494W8 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHRFAM7AQ494W8 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHRFAM7AQ494W8 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHRFAM7AQ494W8 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHRFAM7AQ494W8 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHRFAM7AQ494W8 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CHRFAM7AQ494W8 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHRFAM7AQ494W8 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHRFAM7AQ494W8 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHRFAM7AQ494W8 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
CHRFAM7AQ494W8 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CHRFAM7AQ494W8 SRD5A1P1-201ENST00000442297 786 ntBASIC19.21■□□□□ 0.67
CHRFAM7AQ494W8 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.21■□□□□ 0.67
CHRFAM7AQ494W8 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.21■□□□□ 0.67
CHRFAM7AQ494W8 AC092068.2-201ENST00000590491 1708 ntBASIC19.21■□□□□ 0.67
CHRFAM7AQ494W8 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CHRFAM7AQ494W8 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CHRFAM7AQ494W8 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CHRFAM7AQ494W8 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHRFAM7AQ494W8 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CHRFAM7AQ494W8 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHRFAM7AQ494W8 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHRFAM7AQ494W8 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHRFAM7AQ494W8 DUSP8P3-201ENST00000399571 1760 ntBASIC19.2■□□□□ 0.66
CHRFAM7AQ494W8 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CHRFAM7AQ494W8 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHRFAM7AQ494W8 AC105265.2-201ENST00000467189 838 ntBASIC19.2■□□□□ 0.66
CHRFAM7AQ494W8 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.2■□□□□ 0.66
CHRFAM7AQ494W8 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHRFAM7AQ494W8 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHRFAM7AQ494W8 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHRFAM7AQ494W8 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHRFAM7AQ494W8 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHRFAM7AQ494W8 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHRFAM7AQ494W8 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHRFAM7AQ494W8 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.19■□□□□ 0.66
CHRFAM7AQ494W8 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CHRFAM7AQ494W8 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
CHRFAM7AQ494W8 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
CHRFAM7AQ494W8 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHRFAM7AQ494W8 AL161729.1-201ENST00000604104 1402 ntBASIC19.19■□□□□ 0.66
CHRFAM7AQ494W8 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.19■□□□□ 0.66
CHRFAM7AQ494W8 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.19■□□□□ 0.66
CHRFAM7AQ494W8 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.19■□□□□ 0.66
CHRFAM7AQ494W8 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHRFAM7AQ494W8 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.19■□□□□ 0.66
CHRFAM7AQ494W8 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHRFAM7AQ494W8 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.19■□□□□ 0.66
CHRFAM7AQ494W8 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
CHRFAM7AQ494W8 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
CHRFAM7AQ494W8 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHRFAM7AQ494W8 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.18■□□□□ 0.66
CHRFAM7AQ494W8 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
CHRFAM7AQ494W8 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHRFAM7AQ494W8 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHRFAM7AQ494W8 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.18■□□□□ 0.66
CHRFAM7AQ494W8 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHRFAM7AQ494W8 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHRFAM7AQ494W8 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHRFAM7AQ494W8 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.18■□□□□ 0.66
CHRFAM7AQ494W8 AC024257.2-201ENST00000549699 147 ntBASIC19.18■□□□□ 0.66
CHRFAM7AQ494W8 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.18■□□□□ 0.66
CHRFAM7AQ494W8 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.18■□□□□ 0.66
CHRFAM7AQ494W8 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHRFAM7AQ494W8 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.18■□□□□ 0.66
CHRFAM7AQ494W8 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHRFAM7AQ494W8 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHRFAM7AQ494W8 AC090877.2-201ENST00000558441 1738 ntBASIC19.17■□□□□ 0.66
CHRFAM7AQ494W8 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CHRFAM7AQ494W8 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CHRFAM7AQ494W8 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHRFAM7AQ494W8 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms