Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CDH11P55287 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CDH11P55287 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.21■□□□□ 0.83
CDH11P55287 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.21■□□□□ 0.83
CDH11P55287 MTDHP2-201ENST00000601468 714 ntBASIC20.21■□□□□ 0.83
CDH11P55287 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.21■□□□□ 0.83
CDH11P55287 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDH11P55287 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDH11P55287 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
CDH11P55287 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
CDH11P55287 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.2■□□□□ 0.82
CDH11P55287 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.2■□□□□ 0.82
CDH11P55287 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDH11P55287 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.2■□□□□ 0.82
CDH11P55287 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.2■□□□□ 0.82
CDH11P55287 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CDH11P55287 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.2■□□□□ 0.82
CDH11P55287 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CDH11P55287 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CDH11P55287 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.2■□□□□ 0.82
CDH11P55287 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CDH11P55287 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDH11P55287 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CDH11P55287 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDH11P55287 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CDH11P55287 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.19■□□□□ 0.82
CDH11P55287 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDH11P55287 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CDH11P55287 AC008406.3-201ENST00000620001 1374 ntBASIC20.19■□□□□ 0.82
CDH11P55287 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDH11P55287 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDH11P55287 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDH11P55287 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CDH11P55287 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.18■□□□□ 0.82
CDH11P55287 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDH11P55287 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.18■□□□□ 0.82
CDH11P55287 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.18■□□□□ 0.82
CDH11P55287 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDH11P55287 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.18■□□□□ 0.82
CDH11P55287 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.18■□□□□ 0.82
CDH11P55287 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.18■□□□□ 0.82
CDH11P55287 AC079630.1-202ENST00000618127 1840 ntBASIC20.18■□□□□ 0.82
CDH11P55287 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.18■□□□□ 0.82
CDH11P55287 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDH11P55287 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CDH11P55287 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDH11P55287 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDH11P55287 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.17■□□□□ 0.82
CDH11P55287 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.17■□□□□ 0.82
CDH11P55287 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CDH11P55287 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.17■□□□□ 0.82
CDH11P55287 AC010997.5-201ENST00000609182 354 ntBASIC20.17■□□□□ 0.82
CDH11P55287 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDH11P55287 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.17■□□□□ 0.82
CDH11P55287 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CDH11P55287 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDH11P55287 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
CDH11P55287 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CDH11P55287 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDH11P55287 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
CDH11P55287 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CDH11P55287 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CDH11P55287 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.16■□□□□ 0.82
CDH11P55287 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.16■□□□□ 0.82
CDH11P55287 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CDH11P55287 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDH11P55287 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
CDH11P55287 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDH11P55287 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CDH11P55287 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CDH11P55287 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CDH11P55287 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDH11P55287 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDH11P55287 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDH11P55287 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDH11P55287 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CDH11P55287 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
CDH11P55287 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.15■□□□□ 0.82
CDH11P55287 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.15■□□□□ 0.82
CDH11P55287 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CDH11P55287 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.82
CDH11P55287 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CDH11P55287 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CDH11P55287 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDH11P55287 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDH11P55287 AF131216.4-201ENST00000638924 1588 ntBASIC20.14■□□□□ 0.81
CDH11P55287 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDH11P55287 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDH11P55287 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.14■□□□□ 0.81
CDH11P55287 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.14■□□□□ 0.81
CDH11P55287 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDH11P55287 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CDH11P55287 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDH11P55287 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.13■□□□□ 0.81
CDH11P55287 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDH11P55287 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDH11P55287 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.13■□□□□ 0.81
CDH11P55287 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDH11P55287 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
CDH11P55287 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms