Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.73■■□□□ 1.07
CLCNKAP51800 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLCNKAP51800 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.73■■□□□ 1.07
CLCNKAP51800 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLCNKAP51800 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.73■■□□□ 1.07
CLCNKAP51800 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.73■■□□□ 1.07
CLCNKAP51800 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLCNKAP51800 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLCNKAP51800 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.73■■□□□ 1.07
CLCNKAP51800 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLCNKAP51800 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLCNKAP51800 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLCNKAP51800 ZNRF2P3-201ENST00000424200 374 ntBASIC21.72■■□□□ 1.07
CLCNKAP51800 SLC47A1P1-202ENST00000449666 945 ntBASIC21.72■■□□□ 1.07
CLCNKAP51800 AC105265.2-201ENST00000467189 838 ntBASIC21.72■■□□□ 1.07
CLCNKAP51800 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CLCNKAP51800 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.72■■□□□ 1.07
CLCNKAP51800 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLCNKAP51800 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
CLCNKAP51800 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CLCNKAP51800 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.71■■□□□ 1.07
CLCNKAP51800 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLCNKAP51800 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CLCNKAP51800 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CLCNKAP51800 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLCNKAP51800 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.71■■□□□ 1.07
CLCNKAP51800 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.71■■□□□ 1.07
CLCNKAP51800 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLCNKAP51800 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLCNKAP51800 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CLCNKAP51800 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.7■■□□□ 1.07
CLCNKAP51800 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.7■■□□□ 1.06
CLCNKAP51800 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
CLCNKAP51800 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.7■■□□□ 1.06
CLCNKAP51800 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.7■■□□□ 1.06
CLCNKAP51800 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLCNKAP51800 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLCNKAP51800 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLCNKAP51800 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLCNKAP51800 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLCNKAP51800 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLCNKAP51800 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLCNKAP51800 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLCNKAP51800 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.69■■□□□ 1.06
CLCNKAP51800 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21.69■■□□□ 1.06
CLCNKAP51800 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLCNKAP51800 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.69■■□□□ 1.06
CLCNKAP51800 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.69■■□□□ 1.06
CLCNKAP51800 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLCNKAP51800 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC21.69■■□□□ 1.06
CLCNKAP51800 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLCNKAP51800 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLCNKAP51800 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.69■■□□□ 1.06
CLCNKAP51800 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLCNKAP51800 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
CLCNKAP51800 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLCNKAP51800 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLCNKAP51800 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CLCNKAP51800 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CLCNKAP51800 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CLCNKAP51800 RBM38-205ENST00000440234 686 ntTSL 2 BASIC21.68■■□□□ 1.06
CLCNKAP51800 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
CLCNKAP51800 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.68■■□□□ 1.06
CLCNKAP51800 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
CLCNKAP51800 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.68■■□□□ 1.06
CLCNKAP51800 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CLCNKAP51800 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
CLCNKAP51800 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CLCNKAP51800 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CLCNKAP51800 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
CLCNKAP51800 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.67■■□□□ 1.06
CLCNKAP51800 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CLCNKAP51800 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.67■■□□□ 1.06
CLCNKAP51800 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
CLCNKAP51800 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.67■■□□□ 1.06
CLCNKAP51800 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
CLCNKAP51800 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLCNKAP51800 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLCNKAP51800 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
CLCNKAP51800 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.66■■□□□ 1.06
CLCNKAP51800 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CLCNKAP51800 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CLCNKAP51800 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
CLCNKAP51800 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLCNKAP51800 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
CLCNKAP51800 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLCNKAP51800 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CLCNKAP51800 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLCNKAP51800 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CLCNKAP51800 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
CLCNKAP51800 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC21.66■■□□□ 1.06
CLCNKAP51800 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC21.66■■□□□ 1.06
CLCNKAP51800 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.66■■□□□ 1.06
CLCNKAP51800 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CLCNKAP51800 AC004687.1-201ENST00000579003 1625 ntBASIC21.66■■□□□ 1.06
CLCNKAP51800 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLCNKAP51800 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.65■■□□□ 1.06
CLCNKAP51800 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
CLCNKAP51800 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
CLCNKAP51800 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms