Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
UBE2AP49459 TK2-202ENST00000417693 1046 ntTSL 2 BASIC13.97□□□□□ -0.17
UBE2AP49459 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
UBE2AP49459 KRT125P-201ENST00000546827 989 ntBASIC13.97□□□□□ -0.17
UBE2AP49459 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC13.97□□□□□ -0.17
UBE2AP49459 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC13.97□□□□□ -0.17
UBE2AP49459 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC13.97□□□□□ -0.17
UBE2AP49459 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBE2AP49459 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBE2AP49459 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC13.97□□□□□ -0.17
UBE2AP49459 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBE2AP49459 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBE2AP49459 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
UBE2AP49459 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC13.97□□□□□ -0.17
UBE2AP49459 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBE2AP49459 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBE2AP49459 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
UBE2AP49459 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC13.96□□□□□ -0.17
UBE2AP49459 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC13.96□□□□□ -0.17
UBE2AP49459 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
UBE2AP49459 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
UBE2AP49459 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
UBE2AP49459 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC13.96□□□□□ -0.17
UBE2AP49459 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
UBE2AP49459 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
UBE2AP49459 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
UBE2AP49459 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
UBE2AP49459 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC13.96□□□□□ -0.17
UBE2AP49459 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
UBE2AP49459 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
UBE2AP49459 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC13.96□□□□□ -0.18
UBE2AP49459 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
UBE2AP49459 REST-206ENST00000612429 1376 ntTSL 5 BASIC13.96□□□□□ -0.18
UBE2AP49459 REST-207ENST00000616975 1370 ntTSL 5 BASIC13.96□□□□□ -0.18
UBE2AP49459 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
UBE2AP49459 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
UBE2AP49459 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC13.95□□□□□ -0.18
UBE2AP49459 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UBE2AP49459 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UBE2AP49459 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
UBE2AP49459 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
UBE2AP49459 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UBE2AP49459 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UBE2AP49459 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UBE2AP49459 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC13.95□□□□□ -0.18
UBE2AP49459 ME2-208ENST00000638937 2471 ntTSL 5 BASIC13.95□□□□□ -0.18
UBE2AP49459 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
UBE2AP49459 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC13.95□□□□□ -0.18
UBE2AP49459 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC13.95□□□□□ -0.18
UBE2AP49459 AC137630.3-201ENST00000607245 391 ntBASIC13.95□□□□□ -0.18
UBE2AP49459 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UBE2AP49459 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC13.95□□□□□ -0.18
UBE2AP49459 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UBE2AP49459 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UBE2AP49459 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UBE2AP49459 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
UBE2AP49459 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
UBE2AP49459 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UBE2AP49459 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
UBE2AP49459 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UBE2AP49459 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
UBE2AP49459 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UBE2AP49459 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
UBE2AP49459 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
UBE2AP49459 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
UBE2AP49459 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
UBE2AP49459 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
UBE2AP49459 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
UBE2AP49459 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
UBE2AP49459 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
UBE2AP49459 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
UBE2AP49459 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
UBE2AP49459 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
UBE2AP49459 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
UBE2AP49459 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
UBE2AP49459 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC13.94□□□□□ -0.18
UBE2AP49459 RNF146-205ENST00000477776 762 ntTSL 3 BASIC13.94□□□□□ -0.18
UBE2AP49459 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC13.94□□□□□ -0.18
UBE2AP49459 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
UBE2AP49459 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
UBE2AP49459 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
UBE2AP49459 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC13.94□□□□□ -0.18
UBE2AP49459 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
UBE2AP49459 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
UBE2AP49459 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
UBE2AP49459 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
UBE2AP49459 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
UBE2AP49459 AC092068.2-201ENST00000590491 1708 ntBASIC13.93□□□□□ -0.18
UBE2AP49459 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
UBE2AP49459 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC13.93□□□□□ -0.18
UBE2AP49459 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
UBE2AP49459 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
UBE2AP49459 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
UBE2AP49459 CLDN5-201ENST00000403084 2357 ntBASIC13.93□□□□□ -0.18
UBE2AP49459 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
UBE2AP49459 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
UBE2AP49459 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
UBE2AP49459 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
UBE2AP49459 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
UBE2AP49459 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms