Protein–RNA interactions for Protein: O60906

SMPD2, Sphingomyelin phosphodiesterase 2, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD2O60906 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
SMPD2O60906 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.33■□□□□ 0.68
SMPD2O60906 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
SMPD2O60906 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.33■□□□□ 0.68
SMPD2O60906 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SMPD2O60906 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
SMPD2O60906 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SMPD2O60906 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
SMPD2O60906 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SMPD2O60906 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
SMPD2O60906 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMPD2O60906 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.31■□□□□ 0.68
SMPD2O60906 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
SMPD2O60906 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMPD2O60906 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SMPD2O60906 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMPD2O60906 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SMPD2O60906 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SMPD2O60906 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMPD2O60906 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMPD2O60906 FP325331.1-202ENST00000623531 1380 ntBASIC19.31■□□□□ 0.68
SMPD2O60906 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SMPD2O60906 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMPD2O60906 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMPD2O60906 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
SMPD2O60906 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.3■□□□□ 0.68
SMPD2O60906 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMPD2O60906 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMPD2O60906 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMPD2O60906 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.3■□□□□ 0.68
SMPD2O60906 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.3■□□□□ 0.68
SMPD2O60906 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.3■□□□□ 0.68
SMPD2O60906 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMPD2O60906 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMPD2O60906 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMPD2O60906 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMPD2O60906 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMPD2O60906 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMPD2O60906 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMPD2O60906 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMPD2O60906 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMPD2O60906 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMPD2O60906 LINC01529-204ENST00000636474 1715 ntBASIC19.29■□□□□ 0.68
SMPD2O60906 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.29■□□□□ 0.68
SMPD2O60906 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.29■□□□□ 0.68
SMPD2O60906 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMPD2O60906 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.29■□□□□ 0.68
SMPD2O60906 AC090192.1-201ENST00000517740 490 ntBASIC19.29■□□□□ 0.68
SMPD2O60906 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.29■□□□□ 0.68
SMPD2O60906 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.29■□□□□ 0.68
SMPD2O60906 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.29■□□□□ 0.68
SMPD2O60906 AC126544.1-201ENST00000580842 1059 ntBASIC19.29■□□□□ 0.68
SMPD2O60906 AL137784.2-201ENST00000607332 1000 ntBASIC19.29■□□□□ 0.68
SMPD2O60906 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
SMPD2O60906 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMPD2O60906 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SMPD2O60906 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SMPD2O60906 AL353803.4-201ENST00000565882 1934 ntBASIC19.29■□□□□ 0.68
SMPD2O60906 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.29■□□□□ 0.68
SMPD2O60906 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.29■□□□□ 0.68
SMPD2O60906 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
SMPD2O60906 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
SMPD2O60906 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
SMPD2O60906 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.28■□□□□ 0.68
SMPD2O60906 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
SMPD2O60906 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SMPD2O60906 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.28■□□□□ 0.68
SMPD2O60906 AC006455.2-201ENST00000429931 906 ntBASIC19.28■□□□□ 0.68
SMPD2O60906 MIR3181-201ENST00000578512 73 ntBASIC19.28■□□□□ 0.68
SMPD2O60906 RARRES2P11-201ENST00000635158 484 ntBASIC19.28■□□□□ 0.68
SMPD2O60906 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.28■□□□□ 0.68
SMPD2O60906 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SMPD2O60906 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMPD2O60906 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SMPD2O60906 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
SMPD2O60906 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMPD2O60906 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SMPD2O60906 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SMPD2O60906 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SMPD2O60906 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SMPD2O60906 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SMPD2O60906 DUX4L4-201ENST00000566884 1269 ntBASIC19.27■□□□□ 0.68
SMPD2O60906 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SMPD2O60906 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.27■□□□□ 0.68
SMPD2O60906 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SMPD2O60906 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SMPD2O60906 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.27■□□□□ 0.67
SMPD2O60906 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.27■□□□□ 0.67
SMPD2O60906 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SMPD2O60906 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SMPD2O60906 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SMPD2O60906 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMPD2O60906 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
SMPD2O60906 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMPD2O60906 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.26■□□□□ 0.67
SMPD2O60906 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMPD2O60906 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.26■□□□□ 0.67
SMPD2O60906 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMPD2O60906 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMPD2O60906 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms