Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PRAMEF4O60810 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
PRAMEF4O60810 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.37■■□□□ 1.01
PRAMEF4O60810 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.37■■□□□ 1.01
PRAMEF4O60810 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.37■■□□□ 1.01
PRAMEF4O60810 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
PRAMEF4O60810 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.37■■□□□ 1.01
PRAMEF4O60810 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.36■■□□□ 1.01
PRAMEF4O60810 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PRAMEF4O60810 AC087742.1-201ENST00000575880 1738 ntBASIC21.36■■□□□ 1.01
PRAMEF4O60810 AL117328.2-201ENST00000624617 1940 ntBASIC21.36■■□□□ 1.01
PRAMEF4O60810 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PRAMEF4O60810 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PRAMEF4O60810 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PRAMEF4O60810 AC006455.2-201ENST00000429931 906 ntBASIC21.36■■□□□ 1.01
PRAMEF4O60810 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PRAMEF4O60810 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.36■■□□□ 1.01
PRAMEF4O60810 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PRAMEF4O60810 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
PRAMEF4O60810 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
PRAMEF4O60810 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PRAMEF4O60810 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PRAMEF4O60810 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.36■■□□□ 1.01
PRAMEF4O60810 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.35■■□□□ 1.01
PRAMEF4O60810 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PRAMEF4O60810 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
PRAMEF4O60810 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PRAMEF4O60810 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.35■■□□□ 1.01
PRAMEF4O60810 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.35■■□□□ 1.01
PRAMEF4O60810 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PRAMEF4O60810 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PRAMEF4O60810 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
PRAMEF4O60810 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PRAMEF4O60810 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PRAMEF4O60810 EP400NL-214ENST00000641289 2402 ntBASIC21.34■■□□□ 1.01
PRAMEF4O60810 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PRAMEF4O60810 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PRAMEF4O60810 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
PRAMEF4O60810 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.34■■□□□ 1.01
PRAMEF4O60810 MIR4466-201ENST00000606121 54 ntBASIC21.34■■□□□ 1.01
PRAMEF4O60810 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
PRAMEF4O60810 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.34■■□□□ 1.01
PRAMEF4O60810 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PRAMEF4O60810 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.34■■□□□ 1.01
PRAMEF4O60810 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
PRAMEF4O60810 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
PRAMEF4O60810 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PRAMEF4O60810 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.33■■□□□ 1.01
PRAMEF4O60810 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.33■■□□□ 1.01
PRAMEF4O60810 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PRAMEF4O60810 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.33■■□□□ 1.01
PRAMEF4O60810 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
PRAMEF4O60810 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PRAMEF4O60810 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.33■■□□□ 1.01
PRAMEF4O60810 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PRAMEF4O60810 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PRAMEF4O60810 AL499627.2-201ENST00000606283 725 ntBASIC21.33■■□□□ 1.01
PRAMEF4O60810 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
PRAMEF4O60810 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.33■■□□□ 1.01
PRAMEF4O60810 GUSBP5-202ENST00000510805 1989 ntBASIC21.33■■□□□ 1.01
PRAMEF4O60810 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PRAMEF4O60810 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
PRAMEF4O60810 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.33■■□□□ 1
PRAMEF4O60810 AC004687.1-201ENST00000579003 1625 ntBASIC21.33■■□□□ 1
PRAMEF4O60810 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.32■■□□□ 1
PRAMEF4O60810 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
PRAMEF4O60810 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.32■■□□□ 1
PRAMEF4O60810 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.32■■□□□ 1
PRAMEF4O60810 AC099791.2-201ENST00000605725 427 ntBASIC21.32■■□□□ 1
PRAMEF4O60810 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.32■■□□□ 1
PRAMEF4O60810 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.32■■□□□ 1
PRAMEF4O60810 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
PRAMEF4O60810 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.32■■□□□ 1
PRAMEF4O60810 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
PRAMEF4O60810 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.32■■□□□ 1
PRAMEF4O60810 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PRAMEF4O60810 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PRAMEF4O60810 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PRAMEF4O60810 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
PRAMEF4O60810 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
PRAMEF4O60810 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PRAMEF4O60810 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PRAMEF4O60810 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PRAMEF4O60810 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
PRAMEF4O60810 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.31■■□□□ 1
PRAMEF4O60810 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PRAMEF4O60810 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.31■■□□□ 1
PRAMEF4O60810 AC009086.3-201ENST00000623486 1008 ntBASIC21.31■■□□□ 1
PRAMEF4O60810 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
PRAMEF4O60810 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.31■■□□□ 1
PRAMEF4O60810 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.31■■□□□ 1
PRAMEF4O60810 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.31■■□□□ 1
PRAMEF4O60810 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.31■■□□□ 1
PRAMEF4O60810 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.31■■□□□ 1
PRAMEF4O60810 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
PRAMEF4O60810 ESRRAP2-201ENST00000418437 1549 ntBASIC21.3■■□□□ 1
PRAMEF4O60810 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.3■■□□□ 1
PRAMEF4O60810 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.3■■□□□ 1
PRAMEF4O60810 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.3■■□□□ 1
PRAMEF4O60810 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms