Protein–RNA interactions for Protein: O43676

NDUFB3, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB3O43676 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NDUFB3O43676 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.46■□□□□ 0.55
NDUFB3O43676 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
NDUFB3O43676 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
NDUFB3O43676 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
NDUFB3O43676 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NDUFB3O43676 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NDUFB3O43676 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.46■□□□□ 0.55
NDUFB3O43676 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC18.46■□□□□ 0.55
NDUFB3O43676 PBX2P1-201ENST00000493219 1291 ntBASIC18.46■□□□□ 0.55
NDUFB3O43676 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NDUFB3O43676 AC011298.3-201ENST00000615796 283 ntBASIC18.46■□□□□ 0.55
NDUFB3O43676 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC18.46■□□□□ 0.55
NDUFB3O43676 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
NDUFB3O43676 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC18.46■□□□□ 0.55
NDUFB3O43676 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NDUFB3O43676 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NDUFB3O43676 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.54
NDUFB3O43676 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC18.46■□□□□ 0.54
NDUFB3O43676 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NDUFB3O43676 DUSP8P3-201ENST00000399571 1760 ntBASIC18.45■□□□□ 0.54
NDUFB3O43676 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NDUFB3O43676 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC18.45■□□□□ 0.54
NDUFB3O43676 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
NDUFB3O43676 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NDUFB3O43676 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC18.45■□□□□ 0.54
NDUFB3O43676 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC18.45■□□□□ 0.54
NDUFB3O43676 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NDUFB3O43676 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
NDUFB3O43676 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
NDUFB3O43676 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
NDUFB3O43676 AC135279.3-201ENST00000610945 1311 ntBASIC18.45■□□□□ 0.54
NDUFB3O43676 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NDUFB3O43676 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NDUFB3O43676 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NDUFB3O43676 AC133637.1-201ENST00000624115 1537 ntBASIC18.44■□□□□ 0.54
NDUFB3O43676 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NDUFB3O43676 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NDUFB3O43676 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NDUFB3O43676 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC18.44■□□□□ 0.54
NDUFB3O43676 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
NDUFB3O43676 AL139246.5-201ENST00000606645 996 ntBASIC18.44■□□□□ 0.54
NDUFB3O43676 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
NDUFB3O43676 NFE2L3P1-201ENST00000588207 1959 ntBASIC18.44■□□□□ 0.54
NDUFB3O43676 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC18.43■□□□□ 0.54
NDUFB3O43676 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC18.43■□□□□ 0.54
NDUFB3O43676 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
NDUFB3O43676 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NDUFB3O43676 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
NDUFB3O43676 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NDUFB3O43676 PTMA-205ENST00000410064 814 ntTSL 2 BASIC18.43■□□□□ 0.54
NDUFB3O43676 AC024257.2-201ENST00000549699 147 ntBASIC18.43■□□□□ 0.54
NDUFB3O43676 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
NDUFB3O43676 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
NDUFB3O43676 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NDUFB3O43676 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
NDUFB3O43676 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NDUFB3O43676 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NDUFB3O43676 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC18.42■□□□□ 0.54
NDUFB3O43676 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NDUFB3O43676 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC18.42■□□□□ 0.54
NDUFB3O43676 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC18.42■□□□□ 0.54
NDUFB3O43676 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NDUFB3O43676 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
NDUFB3O43676 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
NDUFB3O43676 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
NDUFB3O43676 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC18.42■□□□□ 0.54
NDUFB3O43676 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC18.42■□□□□ 0.54
NDUFB3O43676 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.42■□□□□ 0.54
NDUFB3O43676 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC18.42■□□□□ 0.54
NDUFB3O43676 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC18.42■□□□□ 0.54
NDUFB3O43676 AC110285.6-201ENST00000617652 491 ntBASIC18.42■□□□□ 0.54
NDUFB3O43676 AC136469.2-201ENST00000623944 1028 ntBASIC18.42■□□□□ 0.54
NDUFB3O43676 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NDUFB3O43676 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NDUFB3O43676 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC18.42■□□□□ 0.54
NDUFB3O43676 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
NDUFB3O43676 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
NDUFB3O43676 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NDUFB3O43676 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NDUFB3O43676 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NDUFB3O43676 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC18.41■□□□□ 0.54
NDUFB3O43676 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NDUFB3O43676 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC18.41■□□□□ 0.54
NDUFB3O43676 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NDUFB3O43676 AC106739.1-201ENST00000617035 715 ntBASIC18.41■□□□□ 0.54
NDUFB3O43676 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
NDUFB3O43676 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NDUFB3O43676 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
NDUFB3O43676 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
NDUFB3O43676 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
NDUFB3O43676 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NDUFB3O43676 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC18.4■□□□□ 0.54
NDUFB3O43676 MTURN-203ENST00000409688 843 ntTSL 2 BASIC18.4■□□□□ 0.54
NDUFB3O43676 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC18.4■□□□□ 0.54
NDUFB3O43676 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC18.4■□□□□ 0.54
NDUFB3O43676 AC004687.1-201ENST00000579003 1625 ntBASIC18.4■□□□□ 0.54
NDUFB3O43676 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NDUFB3O43676 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NDUFB3O43676 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms