Protein–RNA interactions for Protein: A4FU49

SH3D21, SH3 domain-containing protein 21, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21A4FU49 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
SH3D21A4FU49 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SH3D21A4FU49 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.48■□□□□ 0.87
SH3D21A4FU49 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SH3D21A4FU49 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SH3D21A4FU49 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.48■□□□□ 0.87
SH3D21A4FU49 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SH3D21A4FU49 AL136116.3-201ENST00000402907 1138 ntBASIC20.48■□□□□ 0.87
SH3D21A4FU49 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SH3D21A4FU49 MIR3621-201ENST00000580529 85 ntBASIC20.48■□□□□ 0.87
SH3D21A4FU49 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SH3D21A4FU49 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SH3D21A4FU49 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SH3D21A4FU49 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SH3D21A4FU49 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SH3D21A4FU49 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SH3D21A4FU49 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
SH3D21A4FU49 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SH3D21A4FU49 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.47■□□□□ 0.87
SH3D21A4FU49 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SH3D21A4FU49 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.47■□□□□ 0.87
SH3D21A4FU49 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.47■□□□□ 0.87
SH3D21A4FU49 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.47■□□□□ 0.87
SH3D21A4FU49 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
SH3D21A4FU49 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SH3D21A4FU49 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SH3D21A4FU49 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
SH3D21A4FU49 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SH3D21A4FU49 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
SH3D21A4FU49 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SH3D21A4FU49 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SH3D21A4FU49 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SH3D21A4FU49 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.46■□□□□ 0.87
SH3D21A4FU49 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SH3D21A4FU49 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SH3D21A4FU49 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.46■□□□□ 0.87
SH3D21A4FU49 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.46■□□□□ 0.87
SH3D21A4FU49 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.46■□□□□ 0.87
SH3D21A4FU49 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SH3D21A4FU49 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SH3D21A4FU49 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SH3D21A4FU49 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.46■□□□□ 0.87
SH3D21A4FU49 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.46■□□□□ 0.87
SH3D21A4FU49 AF131216.4-201ENST00000638924 1588 ntBASIC20.46■□□□□ 0.87
SH3D21A4FU49 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SH3D21A4FU49 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SH3D21A4FU49 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
SH3D21A4FU49 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
SH3D21A4FU49 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
SH3D21A4FU49 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.45■□□□□ 0.86
SH3D21A4FU49 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.45■□□□□ 0.86
SH3D21A4FU49 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
SH3D21A4FU49 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SH3D21A4FU49 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SH3D21A4FU49 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.45■□□□□ 0.86
SH3D21A4FU49 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SH3D21A4FU49 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SH3D21A4FU49 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.44■□□□□ 0.86
SH3D21A4FU49 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.44■□□□□ 0.86
SH3D21A4FU49 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.44■□□□□ 0.86
SH3D21A4FU49 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SH3D21A4FU49 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.44■□□□□ 0.86
SH3D21A4FU49 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
SH3D21A4FU49 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SH3D21A4FU49 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.44■□□□□ 0.86
SH3D21A4FU49 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SH3D21A4FU49 AL139246.5-201ENST00000606645 996 ntBASIC20.44■□□□□ 0.86
SH3D21A4FU49 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SH3D21A4FU49 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SH3D21A4FU49 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SH3D21A4FU49 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SH3D21A4FU49 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
SH3D21A4FU49 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SH3D21A4FU49 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
SH3D21A4FU49 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SH3D21A4FU49 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.43■□□□□ 0.86
SH3D21A4FU49 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SH3D21A4FU49 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.43■□□□□ 0.86
SH3D21A4FU49 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.43■□□□□ 0.86
SH3D21A4FU49 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SH3D21A4FU49 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.43■□□□□ 0.86
SH3D21A4FU49 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.43■□□□□ 0.86
SH3D21A4FU49 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.43■□□□□ 0.86
SH3D21A4FU49 AC007375.3-201ENST00000600936 2314 ntBASIC20.43■□□□□ 0.86
SH3D21A4FU49 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SH3D21A4FU49 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.43■□□□□ 0.86
SH3D21A4FU49 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
SH3D21A4FU49 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
SH3D21A4FU49 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
SH3D21A4FU49 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SH3D21A4FU49 AL022069.1-201ENST00000568025 1636 ntBASIC20.42■□□□□ 0.86
SH3D21A4FU49 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.42■□□□□ 0.86
SH3D21A4FU49 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SH3D21A4FU49 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SH3D21A4FU49 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
SH3D21A4FU49 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SH3D21A4FU49 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SH3D21A4FU49 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SH3D21A4FU49 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
SH3D21A4FU49 MIR638-201ENST00000385237 100 ntBASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms