Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV13-1A0A0B4J241 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC15.37■□□□□ 0.05
TRAV13-1A0A0B4J241 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV13-1A0A0B4J241 AC139795.1-202ENST00000500444 432 ntBASIC15.37■□□□□ 0.05
TRAV13-1A0A0B4J241 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC15.37■□□□□ 0.05
TRAV13-1A0A0B4J241 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
TRAV13-1A0A0B4J241 AC129492.7-201ENST00000622992 756 ntBASIC15.37■□□□□ 0.05
TRAV13-1A0A0B4J241 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV13-1A0A0B4J241 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV13-1A0A0B4J241 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC15.37■□□□□ 0.05
TRAV13-1A0A0B4J241 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV13-1A0A0B4J241 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC15.36■□□□□ 0.05
TRAV13-1A0A0B4J241 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV13-1A0A0B4J241 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC15.36■□□□□ 0.05
TRAV13-1A0A0B4J241 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV13-1A0A0B4J241 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV13-1A0A0B4J241 AC242852.2-201ENST00000615738 1807 ntBASIC15.36■□□□□ 0.05
TRAV13-1A0A0B4J241 AC079630.1-202ENST00000618127 1840 ntBASIC15.36■□□□□ 0.05
TRAV13-1A0A0B4J241 GCA-201ENST00000233612 1694 ntTSL 2 BASIC15.36■□□□□ 0.05
TRAV13-1A0A0B4J241 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC15.36■□□□□ 0.05
TRAV13-1A0A0B4J241 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV13-1A0A0B4J241 WWC2-AS2-201ENST00000578387 2183 ntBASIC15.36■□□□□ 0.05
TRAV13-1A0A0B4J241 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
TRAV13-1A0A0B4J241 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV13-1A0A0B4J241 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV13-1A0A0B4J241 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC15.36■□□□□ 0.05
TRAV13-1A0A0B4J241 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC15.36■□□□□ 0.05
TRAV13-1A0A0B4J241 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC15.36■□□□□ 0.05
TRAV13-1A0A0B4J241 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV13-1A0A0B4J241 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV13-1A0A0B4J241 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC15.35■□□□□ 0.05
TRAV13-1A0A0B4J241 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV13-1A0A0B4J241 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV13-1A0A0B4J241 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV13-1A0A0B4J241 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC15.35■□□□□ 0.05
TRAV13-1A0A0B4J241 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV13-1A0A0B4J241 ESRRAP2-201ENST00000418437 1549 ntBASIC15.35■□□□□ 0.05
TRAV13-1A0A0B4J241 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV13-1A0A0B4J241 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV13-1A0A0B4J241 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV13-1A0A0B4J241 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC15.35■□□□□ 0.05
TRAV13-1A0A0B4J241 U85056.1-201ENST00000616429 682 ntBASIC15.35■□□□□ 0.05
TRAV13-1A0A0B4J241 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV13-1A0A0B4J241 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV13-1A0A0B4J241 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
TRAV13-1A0A0B4J241 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV13-1A0A0B4J241 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV13-1A0A0B4J241 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV13-1A0A0B4J241 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV13-1A0A0B4J241 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC15.35■□□□□ 0.05
TRAV13-1A0A0B4J241 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV13-1A0A0B4J241 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV13-1A0A0B4J241 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
TRAV13-1A0A0B4J241 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV13-1A0A0B4J241 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC15.34■□□□□ 0.05
TRAV13-1A0A0B4J241 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV13-1A0A0B4J241 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC15.34■□□□□ 0.05
TRAV13-1A0A0B4J241 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
TRAV13-1A0A0B4J241 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV13-1A0A0B4J241 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV13-1A0A0B4J241 RARRES2P2-201ENST00000394842 485 ntBASIC15.34■□□□□ 0.05
TRAV13-1A0A0B4J241 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC15.34■□□□□ 0.05
TRAV13-1A0A0B4J241 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV13-1A0A0B4J241 AC022616.5-201ENST00000518796 181 ntBASIC15.34■□□□□ 0.05
TRAV13-1A0A0B4J241 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV13-1A0A0B4J241 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV13-1A0A0B4J241 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV13-1A0A0B4J241 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV13-1A0A0B4J241 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV13-1A0A0B4J241 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV13-1A0A0B4J241 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV13-1A0A0B4J241 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV13-1A0A0B4J241 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
TRAV13-1A0A0B4J241 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV13-1A0A0B4J241 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRAV13-1A0A0B4J241 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC15.33■□□□□ 0.05
TRAV13-1A0A0B4J241 EFS-203ENST00000429593 2610 ntTSL 2 BASIC15.33■□□□□ 0.05
TRAV13-1A0A0B4J241 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRAV13-1A0A0B4J241 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
TRAV13-1A0A0B4J241 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
TRAV13-1A0A0B4J241 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV13-1A0A0B4J241 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV13-1A0A0B4J241 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
TRAV13-1A0A0B4J241 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV13-1A0A0B4J241 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV13-1A0A0B4J241 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
TRAV13-1A0A0B4J241 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC15.33■□□□□ 0.04
TRAV13-1A0A0B4J241 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
TRAV13-1A0A0B4J241 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV13-1A0A0B4J241 MYB-221ENST00000527615 2381 ntTSL 5 BASIC15.33■□□□□ 0.04
TRAV13-1A0A0B4J241 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV13-1A0A0B4J241 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
TRAV13-1A0A0B4J241 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV13-1A0A0B4J241 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV13-1A0A0B4J241 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV13-1A0A0B4J241 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC15.32■□□□□ 0.04
TRAV13-1A0A0B4J241 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV13-1A0A0B4J241 LBH-205ENST00000407930 756 ntTSL 2 BASIC15.32■□□□□ 0.04
TRAV13-1A0A0B4J241 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC15.32■□□□□ 0.04
TRAV13-1A0A0B4J241 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms