Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRBV6-7A0A0A0MS04 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC18.54■□□□□ 0.56
TRBV6-7A0A0A0MS04 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRBV6-7A0A0A0MS04 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC18.54■□□□□ 0.56
TRBV6-7A0A0A0MS04 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRBV6-7A0A0A0MS04 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC18.54■□□□□ 0.56
TRBV6-7A0A0A0MS04 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
TRBV6-7A0A0A0MS04 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC18.53■□□□□ 0.56
TRBV6-7A0A0A0MS04 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRBV6-7A0A0A0MS04 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRBV6-7A0A0A0MS04 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
TRBV6-7A0A0A0MS04 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC18.53■□□□□ 0.56
TRBV6-7A0A0A0MS04 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC18.53■□□□□ 0.56
TRBV6-7A0A0A0MS04 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
TRBV6-7A0A0A0MS04 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
TRBV6-7A0A0A0MS04 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRBV6-7A0A0A0MS04 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRBV6-7A0A0A0MS04 AL121603.2-201ENST00000557373 2117 ntBASIC18.53■□□□□ 0.56
TRBV6-7A0A0A0MS04 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC18.53■□□□□ 0.56
TRBV6-7A0A0A0MS04 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
TRBV6-7A0A0A0MS04 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRBV6-7A0A0A0MS04 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRBV6-7A0A0A0MS04 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRBV6-7A0A0A0MS04 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRBV6-7A0A0A0MS04 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRBV6-7A0A0A0MS04 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
TRBV6-7A0A0A0MS04 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
TRBV6-7A0A0A0MS04 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRBV6-7A0A0A0MS04 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRBV6-7A0A0A0MS04 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRBV6-7A0A0A0MS04 GUK1-208ENST00000366728 842 ntTSL 2 BASIC18.52■□□□□ 0.56
TRBV6-7A0A0A0MS04 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRBV6-7A0A0A0MS04 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC18.52■□□□□ 0.56
TRBV6-7A0A0A0MS04 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
TRBV6-7A0A0A0MS04 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRBV6-7A0A0A0MS04 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRBV6-7A0A0A0MS04 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRBV6-7A0A0A0MS04 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC18.52■□□□□ 0.55
TRBV6-7A0A0A0MS04 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRBV6-7A0A0A0MS04 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRBV6-7A0A0A0MS04 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRBV6-7A0A0A0MS04 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.51■□□□□ 0.55
TRBV6-7A0A0A0MS04 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRBV6-7A0A0A0MS04 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRBV6-7A0A0A0MS04 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.51■□□□□ 0.55
TRBV6-7A0A0A0MS04 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRBV6-7A0A0A0MS04 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC18.51■□□□□ 0.55
TRBV6-7A0A0A0MS04 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRBV6-7A0A0A0MS04 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
TRBV6-7A0A0A0MS04 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRBV6-7A0A0A0MS04 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
TRBV6-7A0A0A0MS04 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC18.51■□□□□ 0.55
TRBV6-7A0A0A0MS04 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRBV6-7A0A0A0MS04 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRBV6-7A0A0A0MS04 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRBV6-7A0A0A0MS04 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.5■□□□□ 0.55
TRBV6-7A0A0A0MS04 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRBV6-7A0A0A0MS04 AC139530.1-201ENST00000575312 1977 ntBASIC18.5■□□□□ 0.55
TRBV6-7A0A0A0MS04 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRBV6-7A0A0A0MS04 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC18.5■□□□□ 0.55
TRBV6-7A0A0A0MS04 SNX5-217ENST00000606557 1087 ntBASIC18.5■□□□□ 0.55
TRBV6-7A0A0A0MS04 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRBV6-7A0A0A0MS04 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
TRBV6-7A0A0A0MS04 AC092053.2-201ENST00000640557 1818 ntBASIC18.5■□□□□ 0.55
TRBV6-7A0A0A0MS04 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRBV6-7A0A0A0MS04 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRBV6-7A0A0A0MS04 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.49■□□□□ 0.55
TRBV6-7A0A0A0MS04 FBXW4P1-201ENST00000426721 2239 ntBASIC18.49■□□□□ 0.55
TRBV6-7A0A0A0MS04 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRBV6-7A0A0A0MS04 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRBV6-7A0A0A0MS04 REST-206ENST00000612429 1376 ntTSL 5 BASIC18.49■□□□□ 0.55
TRBV6-7A0A0A0MS04 REST-207ENST00000616975 1370 ntTSL 5 BASIC18.49■□□□□ 0.55
TRBV6-7A0A0A0MS04 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRBV6-7A0A0A0MS04 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC18.49■□□□□ 0.55
TRBV6-7A0A0A0MS04 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRBV6-7A0A0A0MS04 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
TRBV6-7A0A0A0MS04 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRBV6-7A0A0A0MS04 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRBV6-7A0A0A0MS04 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
TRBV6-7A0A0A0MS04 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.48■□□□□ 0.55
TRBV6-7A0A0A0MS04 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.48■□□□□ 0.55
TRBV6-7A0A0A0MS04 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
TRBV6-7A0A0A0MS04 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRBV6-7A0A0A0MS04 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRBV6-7A0A0A0MS04 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRBV6-7A0A0A0MS04 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC18.48■□□□□ 0.55
TRBV6-7A0A0A0MS04 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC18.48■□□□□ 0.55
TRBV6-7A0A0A0MS04 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC18.48■□□□□ 0.55
TRBV6-7A0A0A0MS04 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRBV6-7A0A0A0MS04 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
TRBV6-7A0A0A0MS04 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRBV6-7A0A0A0MS04 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.47■□□□□ 0.55
TRBV6-7A0A0A0MS04 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRBV6-7A0A0A0MS04 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC18.47■□□□□ 0.55
TRBV6-7A0A0A0MS04 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC18.47■□□□□ 0.55
TRBV6-7A0A0A0MS04 AC144652.1-201ENST00000609974 1624 ntBASIC18.47■□□□□ 0.55
TRBV6-7A0A0A0MS04 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRBV6-7A0A0A0MS04 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
TRBV6-7A0A0A0MS04 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
TRBV6-7A0A0A0MS04 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms