Protein–RNA interactions for Protein: Q86UP3

ZFHX4, Zinc finger homeobox protein 4, humanhuman

Predictions only

Length 3,567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFHX4Q86UP3 AC025682.1-204ENST00000580045 733 ntTSL 5 BASIC12□□□□□ -0.49
ZFHX4Q86UP3 AL590556.2-201ENST00000637118 1162 ntTSL 5 BASIC12□□□□□ -0.49
ZFHX4Q86UP3 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
ZFHX4Q86UP3 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ZFHX4Q86UP3 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
ZFHX4Q86UP3 AC100774.1-201ENST00000565581 1603 ntBASIC12□□□□□ -0.49
ZFHX4Q86UP3 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC12□□□□□ -0.49
ZFHX4Q86UP3 NR1H3-201ENST00000395397 1501 ntTSL 1 (best) BASIC12□□□□□ -0.49
ZFHX4Q86UP3 CHI3L2-202ENST00000369748 1468 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
ZFHX4Q86UP3 ELOC-205ENST00000520210 1451 ntTSL 1 (best) BASIC12□□□□□ -0.49
ZFHX4Q86UP3 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
ZFHX4Q86UP3 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
ZFHX4Q86UP3 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ZFHX4Q86UP3 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ZFHX4Q86UP3 NDRG4-254ENST00000569923 1312 ntTSL 2 BASIC11.99□□□□□ -0.49
ZFHX4Q86UP3 HDGF-203ENST00000368209 2171 ntTSL 2 BASIC11.99□□□□□ -0.49
ZFHX4Q86UP3 SERF2-202ENST00000339624 506 ntTSL 2 BASIC11.99□□□□□ -0.49
ZFHX4Q86UP3 AC004231.1-201ENST00000418393 815 ntTSL 5 BASIC11.99□□□□□ -0.49
ZFHX4Q86UP3 AC010997.3-201ENST00000418818 502 ntTSL 3 BASIC11.99□□□□□ -0.49
ZFHX4Q86UP3 PRKRIP1-202ENST00000462601 884 ntTSL 2 BASIC11.99□□□□□ -0.49
ZFHX4Q86UP3 HOPX-209ENST00000508121 904 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
ZFHX4Q86UP3 RAD52-212ENST00000541619 560 ntTSL 4 BASIC11.99□□□□□ -0.49
ZFHX4Q86UP3 LINC00663-207ENST00000590092 1023 ntTSL 5 BASIC11.99□□□□□ -0.49
ZFHX4Q86UP3 CLEC4M-210ENST00000597522 811 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
ZFHX4Q86UP3 AC027348.1-201ENST00000615979 615 ntBASIC11.99□□□□□ -0.49
ZFHX4Q86UP3 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ZFHX4Q86UP3 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
ZFHX4Q86UP3 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC11.99□□□□□ -0.49
ZFHX4Q86UP3 AL009178.2-201ENST00000597278 2719 ntBASIC11.99□□□□□ -0.49
ZFHX4Q86UP3 TRPV1-201ENST00000310522 2340 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
ZFHX4Q86UP3 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
ZFHX4Q86UP3 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC11.99□□□□□ -0.49
ZFHX4Q86UP3 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ZFHX4Q86UP3 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
ZFHX4Q86UP3 AC092295.2-201ENST00000592087 1392 ntBASIC11.99□□□□□ -0.49
ZFHX4Q86UP3 GPR12-201ENST00000381436 1981 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
ZFHX4Q86UP3 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
ZFHX4Q86UP3 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
ZFHX4Q86UP3 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
ZFHX4Q86UP3 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ZFHX4Q86UP3 C2-211ENST00000469372 1906 ntTSL 2 BASIC11.99□□□□□ -0.49
ZFHX4Q86UP3 RNU4-8P-201ENST00000364936 141 ntBASIC11.99□□□□□ -0.49
ZFHX4Q86UP3 AL355001.1-201ENST00000422148 444 ntTSL 5 BASIC11.99□□□□□ -0.49
ZFHX4Q86UP3 AL359979.2-201ENST00000435108 613 ntTSL 3 BASIC11.99□□□□□ -0.49
ZFHX4Q86UP3 RPE-214ENST00000452025 779 ntTSL 3 BASIC11.99□□□□□ -0.49
ZFHX4Q86UP3 KRT19P3-201ENST00000507547 828 ntBASIC11.99□□□□□ -0.49
ZFHX4Q86UP3 AC142391.1-201ENST00000515823 1002 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
ZFHX4Q86UP3 LINC02182-201ENST00000569362 498 ntTSL 2 BASIC11.99□□□□□ -0.49
ZFHX4Q86UP3 LINC01535-204ENST00000591116 815 ntTSL 3 BASIC11.99□□□□□ -0.49
ZFHX4Q86UP3 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC11.99□□□□□ -0.49
ZFHX4Q86UP3 PMS1-204ENST00000409823 2795 ntTSL 5 BASIC11.99□□□□□ -0.49
ZFHX4Q86UP3 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC11.99□□□□□ -0.49
ZFHX4Q86UP3 TFB1M-201ENST00000367166 1424 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ZFHX4Q86UP3 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ZFHX4Q86UP3 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ZFHX4Q86UP3 AC102953.2-201ENST00000609755 3026 ntBASIC11.99□□□□□ -0.49
ZFHX4Q86UP3 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
ZFHX4Q86UP3 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC11.99□□□□□ -0.49
ZFHX4Q86UP3 F2-205ENST00000530231 1849 ntTSL 5 BASIC11.99□□□□□ -0.49
ZFHX4Q86UP3 UBE2A-201ENST00000346330 718 ntAPPRIS ALT1 TSL 5 BASIC11.99□□□□□ -0.49
ZFHX4Q86UP3 AC139887.2-204ENST00000503405 550 ntTSL 3 BASIC11.99□□□□□ -0.49
ZFHX4Q86UP3 AP001360.1-201ENST00000534055 518 ntTSL 2 BASIC11.99□□□□□ -0.49
ZFHX4Q86UP3 SLIRP-211ENST00000557623 865 ntTSL 2 BASIC11.99□□□□□ -0.49
ZFHX4Q86UP3 ALOX12-AS1-203ENST00000570562 567 ntTSL 3 BASIC11.99□□□□□ -0.49
ZFHX4Q86UP3 LINC00868-203ENST00000592919 853 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
ZFHX4Q86UP3 AC087893.1-201ENST00000612818 664 ntBASIC11.99□□□□□ -0.49
ZFHX4Q86UP3 CLUHP8-201ENST00000547527 1485 ntBASIC11.99□□□□□ -0.49
ZFHX4Q86UP3 TNRC6B-203ENST00000402203 3444 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
ZFHX4Q86UP3 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
ZFHX4Q86UP3 RPUSD4-208ENST00000533628 2053 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
ZFHX4Q86UP3 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
ZFHX4Q86UP3 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC11.98□□□□□ -0.49
ZFHX4Q86UP3 METTL1-201ENST00000257848 1096 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
ZFHX4Q86UP3 AC004951.2-201ENST00000420754 789 ntBASIC11.98□□□□□ -0.49
ZFHX4Q86UP3 GSTK1-205ENST00000443571 850 ntTSL 2 BASIC11.98□□□□□ -0.49
ZFHX4Q86UP3 AL049597.1-201ENST00000447415 555 ntBASIC11.98□□□□□ -0.49
ZFHX4Q86UP3 AC016650.1-201ENST00000502834 708 ntTSL 2 BASIC11.98□□□□□ -0.49
ZFHX4Q86UP3 AC138305.1-201ENST00000568932 561 ntTSL 5 BASIC11.98□□□□□ -0.49
ZFHX4Q86UP3 LYNX1-205ENST00000620006 868 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
ZFHX4Q86UP3 AC091167.7-201ENST00000622269 518 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
ZFHX4Q86UP3 AC083841.4-201ENST00000637396 352 ntBASIC11.98□□□□□ -0.49
ZFHX4Q86UP3 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ZFHX4Q86UP3 EIF2B3-203ENST00000372183 1457 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
ZFHX4Q86UP3 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
ZFHX4Q86UP3 SPATA22-204ENST00000541913 1683 ntTSL 2 BASIC11.98□□□□□ -0.49
ZFHX4Q86UP3 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
ZFHX4Q86UP3 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
ZFHX4Q86UP3 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC11.98□□□□□ -0.49
ZFHX4Q86UP3 LSS-211ENST00000522411 2523 ntTSL 2 BASIC11.98□□□□□ -0.49
ZFHX4Q86UP3 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ZFHX4Q86UP3 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
ZFHX4Q86UP3 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ZFHX4Q86UP3 S100A4-201ENST00000354332 566 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ZFHX4Q86UP3 S100A4-203ENST00000368715 573 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
ZFHX4Q86UP3 S100A4-204ENST00000368716 600 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ZFHX4Q86UP3 NDUFS5-201ENST00000372967 544 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ZFHX4Q86UP3 NDUFS5-202ENST00000372969 548 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ZFHX4Q86UP3 CD74-203ENST00000377795 1138 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
ZFHX4Q86UP3 SMIM21-201ENST00000382638 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
ZFHX4Q86UP3 AL117329.2-201ENST00000413815 740 ntBASIC11.98□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms