RNA–Protein interactions for RNA: ENST00000368716.8

S100A4-204, Transcript of S100 calcium binding protein A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene S100A4, Length 600 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
S100A4-204ENST00000368716 NISCHQ9Y2I1 1504 aa24.39■■□□□ 1.49
S100A4-204ENST00000368716 DNAJC5BQ9UF47 199 aa23.69■■□□□ 1.38
S100A4-204ENST00000368716 ABCC9O60706 1549 aa23.59■■□□□ 1.37
S100A4-204ENST00000368716 DNAJC5Q9H3Z4 198 aa22.73■■□□□ 1.23
S100A4-204ENST00000368716 CCDC180Q9P1Z9 1646 aa21.89■■□□□ 1.09
S100A4-204ENST00000368716 PABPN1Q86U42 306 aaKnown RBP eCLIP21.86■■□□□ 1.09
S100A4-204ENST00000368716 RB1CC1Q8TDY2 1594 aa21.55■■□□□ 1.04
S100A4-204ENST00000368716 CECR2Q9BXF3 1484 aa21.35■■□□□ 1.01
S100A4-204ENST00000368716 TRIM41Q8WV44 630 aa21.18■□□□□ 0.98
S100A4-204ENST00000368716 CC2D2AQ9P2K1 1620 aa21.11■□□□□ 0.97
S100A4-204ENST00000368716 BICRAQ9NZM4 1560 aa21.09■□□□□ 0.97
S100A4-204ENST00000368716 NACADO15069 1562 aa21.02■□□□□ 0.96
S100A4-204ENST00000368716 UNC13AQ9UPW8 1703 aa20.98■□□□□ 0.95
S100A4-204ENST00000368716 DCAF8L2P0C7V8 631 aa20.97■□□□□ 0.95
S100A4-204ENST00000368716 CUX2O14529 1486 aa20.79■□□□□ 0.92
S100A4-204ENST00000368716 EIF4G1Q04637 1599 aaKnown RBP20.67■□□□□ 0.9
S100A4-204ENST00000368716 MYO15BQ96JP2 1530 aa20.51■□□□□ 0.87
S100A4-204ENST00000368716 SHROOM4Q9ULL8 1493 aa20.43■□□□□ 0.86
S100A4-204ENST00000368716 ERCC6Q03468 1493 aa20.38■□□□□ 0.85
S100A4-204ENST00000368716 AEBP2Q6ZN18 517 aaPredicted RBP20.25■□□□□ 0.83
S100A4-204ENST00000368716 DCAF1Q9Y4B6 1507 aa20.17■□□□□ 0.82
S100A4-204ENST00000368716 ZCCHC6Q5VYS8 1495 aaKnown RBP20.16■□□□□ 0.82
S100A4-204ENST00000368716 SCRIBQ14160 1630 aa20.01■□□□□ 0.79
S100A4-204ENST00000368716 NESP48681 1621 aa19.84■□□□□ 0.77
S100A4-204ENST00000368716 ILDR1Q86SU0 546 aaPredicted RBP19.8■□□□□ 0.76
S100A4-204ENST00000368716 THOC2Q8NI27 1593 aaKnown RBP19.76■□□□□ 0.75
S100A4-204ENST00000368716 TRHP20396 242 aaPredicted RBP19.74■□□□□ 0.75
S100A4-204ENST00000368716 OSCARQ8IYS5 282 aa19.74■□□□□ 0.75
S100A4-204ENST00000368716 SMARCA2P51531 1590 aa19.57■□□□□ 0.72
S100A4-204ENST00000368716 NCAPD3P42695 1498 aa19.54■□□□□ 0.72
S100A4-204ENST00000368716 BAZ1AQ9NRL2 1556 aaPredicted RBP19.54■□□□□ 0.72
S100A4-204ENST00000368716 RIMBP3CA6NJZ7 1639 aa19.54■□□□□ 0.72
S100A4-204ENST00000368716 RIMBP3BA6NNM3 1639 aa19.54■□□□□ 0.72
S100A4-204ENST00000368716 RIMBP3Q9UFD9 1639 aa19.54■□□□□ 0.72
S100A4-204ENST00000368716 CYB5RLQ6IPT4 315 aa19.47■□□□□ 0.71
S100A4-204ENST00000368716 ARHGEF11O15085 1522 aa19.35■□□□□ 0.69
S100A4-204ENST00000368716 KIF21AQ7Z4S6 1674 aa19.32■□□□□ 0.68
S100A4-204ENST00000368716 ATAD2BQ9ULI0 1458 aa19.3■□□□□ 0.68
S100A4-204ENST00000368716 PDS5BQ9NTI5 1447 aa19.26■□□□□ 0.67
S100A4-204ENST00000368716 LAMC3Q9Y6N6 1575 aa19.22■□□□□ 0.67
S100A4-204ENST00000368716 MRC2Q9UBG0 1479 aa19.19■□□□□ 0.66
S100A4-204ENST00000368716 WDR62O43379 1518 aa19.15■□□□□ 0.66
S100A4-204ENST00000368716 HMGXB3Q12766 1538 aa19.14■□□□□ 0.65
S100A4-204ENST00000368716 ARAP1Q96P48 1450 aa19.1■□□□□ 0.65
S100A4-204ENST00000368716 SMARCA4P51532 1647 aa19.01■□□□□ 0.63
S100A4-204ENST00000368716 BAZ1BQ9UIG0 1483 aaKnown RBP18.97■□□□□ 0.63
S100A4-204ENST00000368716 CADPSQ9ULU8 1353 aa18.92■□□□□ 0.62
S100A4-204ENST00000368716 PEG3Q9GZU2 1588 aa18.87■□□□□ 0.61
S100A4-204ENST00000368716 CEP164Q9UPV0 1460 aa18.79■□□□□ 0.6
S100A4-204ENST00000368716 KDM4FA0A1W2PPD8 638 aa18.79■□□□□ 0.6
S100A4-204ENST00000368716 MROH2BQ7Z745 1585 aa18.76■□□□□ 0.59
S100A4-204ENST00000368716 ZNF608Q9ULD9 1512 aaPredicted RBP18.74■□□□□ 0.59
S100A4-204ENST00000368716 RSF1Q96T23 1441 aaPredicted RBP18.69■□□□□ 0.58
S100A4-204ENST00000368716 FANCD2Q9BXW9 1451 aa18.69■□□□□ 0.58
S100A4-204ENST00000368716 URB2Q14146 1524 aaKnown RBP18.65■□□□□ 0.58
S100A4-204ENST00000368716 FBLN2P98095 1184 aa18.63■□□□□ 0.57
S100A4-204ENST00000368716 FBXO41Q8TF61 875 aa18.59■□□□□ 0.57
S100A4-204ENST00000368716 LMTK3Q96Q04 1460 aa18.57■□□□□ 0.56
S100A4-204ENST00000368716 SOCS7O14512 581 aa18.52■□□□□ 0.56
S100A4-204ENST00000368716 ILDR2Q71H61 639 aa18.51■□□□□ 0.55
S100A4-204ENST00000368716 WIZO95785 1651 aa18.49■□□□□ 0.55
S100A4-204ENST00000368716 CHD1O14646 1710 aa18.49■□□□□ 0.55
S100A4-204ENST00000368716 IFT140Q96RY7 1462 aa18.48■□□□□ 0.55
S100A4-204ENST00000368716 AQRO60306 1485 aaKnown RBP eCLIP18.39■□□□□ 0.54
S100A4-204ENST00000368716 CFTRP13569 1480 aa18.39■□□□□ 0.53
S100A4-204ENST00000368716 EIF4G3O43432 1585 aaKnown RBP18.38■□□□□ 0.53
S100A4-204ENST00000368716 ERCC6L2Q5T890 1561 aa18.37■□□□□ 0.53
S100A4-204ENST00000368716 HECW2Q9P2P5 1572 aa18.34■□□□□ 0.53
S100A4-204ENST00000368716 GAPVD1Q14C86 1478 aa18.32■□□□□ 0.52
S100A4-204ENST00000368716 CLASP1Q7Z460 1538 aa18.31■□□□□ 0.52
S100A4-204ENST00000368716 TOP2AP11388 1531 aaKnown RBP18.28■□□□□ 0.52
S100A4-204ENST00000368716 SYNJ2O15056 1496 aa18.2■□□□□ 0.5
S100A4-204ENST00000368716 DISP3Q9P2K9 1392 aa18.19■□□□□ 0.5
S100A4-204ENST00000368716 CHMP7Q8WUX9 453 aaPredicted RBP18.17■□□□□ 0.5
S100A4-204ENST00000368716 TOPBP1Q92547 1522 aa18.15■□□□□ 0.5
S100A4-204ENST00000368716 FAM69CQ0P6D2 419 aa18.15■□□□□ 0.5
S100A4-204ENST00000368716 KIF13AQ9H1H9 1805 aa18.14■□□□□ 0.5
S100A4-204ENST00000368716 ADGRL1O94910 1474 aa18.13■□□□□ 0.49
S100A4-204ENST00000368716 CCDC88BA6NC98 1476 aa18.12■□□□□ 0.49
S100A4-204ENST00000368716 SYNJ1O43426 1573 aa18.1■□□□□ 0.49
S100A4-204ENST00000368716 SNAPC4Q5SXM2 1469 aa18.07■□□□□ 0.48
S100A4-204ENST00000368716 KDM6BO15054 1643 aa18.05■□□□□ 0.48
S100A4-204ENST00000368716 TDRD9Q8NDG6 1382 aaKnown RBP18.05■□□□□ 0.48
S100A4-204ENST00000368716 PRDM2Q13029 1718 aa18.04■□□□□ 0.48
S100A4-204ENST00000368716 TARBP1Q13395 1621 aaKnown RBP18.04■□□□□ 0.48
S100A4-204ENST00000368716 ABCC8Q09428 1581 aa18.04■□□□□ 0.48
S100A4-204ENST00000368716 ABCC10Q5T3U5 1492 aa17.97■□□□□ 0.47
S100A4-204ENST00000368716 RAD54L2Q9Y4B4 1467 aa17.94■□□□□ 0.46
S100A4-204ENST00000368716 DNMBPQ6XZF7 1577 aa17.91■□□□□ 0.46
S100A4-204ENST00000368716 POLA1P09884 1462 aaPredicted RBP17.88■□□□□ 0.45
S100A4-204ENST00000368716 MAGI1Q96QZ7 1491 aaPredicted RBP17.86■□□□□ 0.45
S100A4-204ENST00000368716 SOGA1O94964 1423 aa17.81■□□□□ 0.44
S100A4-204ENST00000368716 DIP2BQ9P265 1576 aa17.81■□□□□ 0.44
S100A4-204ENST00000368716 GRIN2BQ13224 1484 aa17.75■□□□□ 0.43
S100A4-204ENST00000368716 CEP170Q5SW79 1584 aa17.75■□□□□ 0.43
S100A4-204ENST00000368716 NPM1P06748 294 aaKnown RBP eCLIP17.75■□□□□ 0.43
S100A4-204ENST00000368716 TSPOAP1O95153 1857 aa17.73■□□□□ 0.43
S100A4-204ENST00000368716 SPATA31D1Q6ZQQ2 1576 aa17.7■□□□□ 0.42
S100A4-204ENST00000368716 CERKQ8TCT0 537 aa17.7■□□□□ 0.42
S100A4-204ENST00000368716 MAPKBP1O60336 1514 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms