Protein–RNA interactions for Protein: P08908

HTR1A, 5-hydroxytryptamine receptor 1A, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1AP08908 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
HTR1AP08908 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
HTR1AP08908 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
HTR1AP08908 NLRP2-208ENST00000448584 3573 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
HTR1AP08908 FOSB-204ENST00000585836 3550 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
HTR1AP08908 DYNC1I1-204ENST00000437599 2895 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
HTR1AP08908 KRT8P43-201ENST00000406052 1458 ntBASIC12.26□□□□□ -0.45
HTR1AP08908 ARHGEF2-206ENST00000462460 4438 ntTSL 5 BASIC12.26□□□□□ -0.45
HTR1AP08908 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
HTR1AP08908 AL645608.3-201ENST00000448179 3043 ntTSL 2 BASIC12.26□□□□□ -0.45
HTR1AP08908 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
HTR1AP08908 PCGF2-204ENST00000616199 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
HTR1AP08908 KCNMA1-241ENST00000638606 3852 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
HTR1AP08908 KCNMA1-279ENST00000640182 3852 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
HTR1AP08908 TRPC3-205ENST00000513531 2382 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
HTR1AP08908 TMCO4-202ENST00000375127 2403 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
HTR1AP08908 TMEM200A-201ENST00000296978 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HTR1AP08908 HADH-210ENST00000626637 1774 ntTSL 2 BASIC12.25□□□□□ -0.45
HTR1AP08908 ZNF606-204ENST00000547828 2680 ntTSL 2 BASIC12.25□□□□□ -0.45
HTR1AP08908 FLCN-201ENST00000285071 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HTR1AP08908 AHI1-205ENST00000457866 5549 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
HTR1AP08908 TP53I11-220ENST00000533940 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HTR1AP08908 STRAP-202ENST00000419869 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HTR1AP08908 TBC1D26-201ENST00000437605 1868 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
HTR1AP08908 SCML1-201ENST00000380041 1997 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
HTR1AP08908 VRK3-205ENST00000593919 1979 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HTR1AP08908 KRI1-201ENST00000312962 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HTR1AP08908 DNAJC9-201ENST00000372950 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HTR1AP08908 PPARG-206ENST00000397012 2006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HTR1AP08908 AC067931.2-201ENST00000623655 2003 ntBASIC12.25□□□□□ -0.45
HTR1AP08908 STXBP1-220ENST00000637521 2068 ntTSL 5 BASIC12.25□□□□□ -0.45
HTR1AP08908 ARHGEF9-218ENST00000624843 2154 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HTR1AP08908 TP53I11-203ENST00000395648 3381 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
HTR1AP08908 SYNM-203ENST00000560674 5908 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HTR1AP08908 RGS9-203ENST00000449996 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
HTR1AP08908 ESPNL-203ENST00000409506 3610 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HTR1AP08908 DCLRE1C-208ENST00000378258 2463 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HTR1AP08908 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HTR1AP08908 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HTR1AP08908 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HTR1AP08908 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC12.25□□□□□ -0.45
HTR1AP08908 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
HTR1AP08908 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC12.25□□□□□ -0.45
HTR1AP08908 BOLA2P3-201ENST00000404566 256 ntBASIC12.25□□□□□ -0.45
HTR1AP08908 HIST1H2BPS3-201ENST00000419683 341 ntBASIC12.25□□□□□ -0.45
HTR1AP08908 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC12.25□□□□□ -0.45
HTR1AP08908 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC12.25□□□□□ -0.45
HTR1AP08908 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC12.25□□□□□ -0.45
HTR1AP08908 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC12.25□□□□□ -0.45
HTR1AP08908 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC12.25□□□□□ -0.45
HTR1AP08908 CROCCP4-201ENST00000457096 498 ntBASIC12.25□□□□□ -0.45
HTR1AP08908 RPL18P13-201ENST00000478088 569 ntBASIC12.25□□□□□ -0.45
HTR1AP08908 RN7SL277P-201ENST00000481521 288 ntBASIC12.25□□□□□ -0.45
HTR1AP08908 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC12.25□□□□□ -0.45
HTR1AP08908 CD81-209ENST00000492627 886 ntTSL 3 BASIC12.25□□□□□ -0.45
HTR1AP08908 CD164-210ENST00000512821 964 ntTSL 2 BASIC12.25□□□□□ -0.45
HTR1AP08908 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HTR1AP08908 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC12.25□□□□□ -0.45
HTR1AP08908 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HTR1AP08908 EEF1DP1-201ENST00000585891 896 ntBASIC12.25□□□□□ -0.45
HTR1AP08908 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
HTR1AP08908 CYGB-203ENST00000589145 788 ntTSL 3 BASIC12.25□□□□□ -0.45
HTR1AP08908 SRP9-204ENST00000619790 377 ntTSL 2 BASIC12.25□□□□□ -0.45
HTR1AP08908 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
HTR1AP08908 ZBTB44-202ENST00000397753 3951 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
HTR1AP08908 PCNX4-202ENST00000391611 4073 ntTSL 2 BASIC12.25□□□□□ -0.45
HTR1AP08908 AXIN2-209ENST00000618960 4060 ntTSL 5 BASIC12.25□□□□□ -0.45
HTR1AP08908 RNF4-222ENST00000541204 2796 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HTR1AP08908 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
HTR1AP08908 ARHGAP25-201ENST00000409030 2936 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HTR1AP08908 ESYT3-202ENST00000389567 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HTR1AP08908 USP33-203ENST00000370793 4502 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HTR1AP08908 PPP3CB-204ENST00000394829 3149 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
HTR1AP08908 PLK4-203ENST00000507249 3195 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
HTR1AP08908 RTL10-201ENST00000328554 6619 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
HTR1AP08908 BCL2L13-214ENST00000543133 4975 ntTSL 2 BASIC12.25□□□□□ -0.45
HTR1AP08908 BCL2L13-217ENST00000618481 4961 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
HTR1AP08908 TBC1D3I-203ENST00000621034 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HTR1AP08908 KIR3DL1-201ENST00000326542 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
HTR1AP08908 LRFN5-201ENST00000298119 3723 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
HTR1AP08908 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
HTR1AP08908 NHSL1-204ENST00000427025 7500 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
HTR1AP08908 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HTR1AP08908 MTMR3-201ENST00000323630 5866 ntTSL 5 BASIC12.25□□□□□ -0.45
HTR1AP08908 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HTR1AP08908 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
HTR1AP08908 CENPP-203ENST00000375587 8766 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HTR1AP08908 GAL3ST4-203ENST00000413800 2334 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HTR1AP08908 SRRM5-201ENST00000417606 2381 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
HTR1AP08908 HCG18-236ENST00000438412 2440 ntTSL 2 BASIC12.25□□□□□ -0.45
HTR1AP08908 NEFM-204ENST00000518131 2500 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
HTR1AP08908 LRRC8E-206ENST00000618098 3743 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
HTR1AP08908 MCFD2-212ENST00000444761 4169 ntTSL 2 BASIC12.24□□□□□ -0.45
HTR1AP08908 SLA2-201ENST00000262866 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HTR1AP08908 SEC24B-201ENST00000265175 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
HTR1AP08908 GPD1-201ENST00000301149 3082 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HTR1AP08908 GPR173-201ENST00000332582 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HTR1AP08908 CEP83-201ENST00000339839 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HTR1AP08908 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HTR1AP08908 USP20-202ENST00000358355 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms