Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC12.26□□□□□ -0.45
P04436 NR1H4-203ENST00000392986 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
P04436 IWS1-201ENST00000295321 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
P04436 NFE2L1-203ENST00000362042 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
P04436 FRMD6-203ENST00000395718 4828 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
P04436 MRRF-201ENST00000297908 1841 ntTSL 2 BASIC12.26□□□□□ -0.45
P04436 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
P04436 SMARCA2-254ENST00000636903 2471 ntTSL 5 BASIC12.26□□□□□ -0.45
P04436 KIR3DL1-203ENST00000391728 1871 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
P04436 POM121L4P-202ENST00000427789 1891 ntBASIC12.26□□□□□ -0.45
P04436 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
P04436 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
P04436 HIGD2A-201ENST00000274787 668 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
P04436 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
P04436 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
P04436 TMEM14B-201ENST00000379530 787 ntTSL 2 BASIC12.26□□□□□ -0.45
P04436 CFL1P6-201ENST00000400899 494 ntBASIC12.26□□□□□ -0.45
P04436 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC12.26□□□□□ -0.45
P04436 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC12.26□□□□□ -0.45
P04436 PGK1P2-201ENST00000431702 1214 ntBASIC12.26□□□□□ -0.45
P04436 AC025171.3-201ENST00000509036 472 ntTSL 2 BASIC12.26□□□□□ -0.45
P04436 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
P04436 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC12.26□□□□□ -0.45
P04436 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
P04436 AP003071.1-201ENST00000567925 622 ntTSL 3 BASIC12.26□□□□□ -0.45
P04436 GMFG-206ENST00000597595 758 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
P04436 AP000553.2-201ENST00000609038 441 ntBASIC12.26□□□□□ -0.45
P04436 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
P04436 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
P04436 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
P04436 SNX33-201ENST00000308527 8008 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
P04436 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
P04436 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
P04436 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
P04436 CCDC159-209ENST00000588790 1408 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
P04436 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC12.26□□□□□ -0.45
P04436 AC007336.3-201ENST00000623886 2160 ntBASIC12.26□□□□□ -0.45
P04436 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
P04436 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
P04436 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
P04436 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
P04436 AC091807.1-201ENST00000418838 1544 ntBASIC12.26□□□□□ -0.45
P04436 MRFAP1L1-201ENST00000320848 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
P04436 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
P04436 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC12.26□□□□□ -0.45
P04436 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
P04436 DDX11L1-202ENST00000456328 1657 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
P04436 DDX11L10-202ENST00000513886 1652 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
P04436 DDX11L9-203ENST00000562189 1652 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
P04436 TBC1D3P1-201ENST00000590047 1693 ntBASIC12.26□□□□□ -0.45
P04436 PRMT5-202ENST00000324366 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
P04436 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC12.26□□□□□ -0.45
P04436 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC12.26□□□□□ -0.45
P04436 NSD2-206ENST00000382895 7827 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
P04436 IP6K2-201ENST00000328631 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
P04436 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC12.25□□□□□ -0.45
P04436 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
P04436 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
P04436 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC12.25□□□□□ -0.45
P04436 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
P04436 CCDC88C-204ENST00000389857 7474 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
P04436 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
P04436 PARD6B-201ENST00000371610 4615 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
P04436 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
P04436 LSS-211ENST00000522411 2523 ntTSL 2 BASIC12.25□□□□□ -0.45
P04436 COX20P1-201ENST00000366529 357 ntBASIC12.25□□□□□ -0.45
P04436 MRPL36-201ENST00000382647 587 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
P04436 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
P04436 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
P04436 MIR1227-201ENST00000408484 88 ntBASIC12.25□□□□□ -0.45
P04436 HNRNPA1P33-201ENST00000421426 561 ntBASIC12.25□□□□□ -0.45
P04436 AL139008.1-201ENST00000437894 228 ntBASIC12.25□□□□□ -0.45
P04436 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC12.25□□□□□ -0.45
P04436 RPSAP69-201ENST00000445739 546 ntTSL 4 BASIC12.25□□□□□ -0.45
P04436 AGPAT5P1-201ENST00000455855 1019 ntBASIC12.25□□□□□ -0.45
P04436 BCL2L12P1-201ENST00000508390 733 ntBASIC12.25□□□□□ -0.45
P04436 IGHVII-74-1-201ENST00000517572 241 ntBASIC12.25□□□□□ -0.45
P04436 KNOP1P1-201ENST00000542108 989 ntBASIC12.25□□□□□ -0.45
P04436 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
P04436 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC12.25□□□□□ -0.45
P04436 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
P04436 AC018845.3-201ENST00000562536 516 ntTSL 3 BASIC12.25□□□□□ -0.45
P04436 AC005357.2-202ENST00000590507 1060 ntBASIC12.25□□□□□ -0.45
P04436 AC026304.1-201ENST00000597953 561 ntBASIC12.25□□□□□ -0.45
P04436 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC12.25□□□□□ -0.45
P04436 ALDOA-229ENST00000636698 420 ntTSL 3 BASIC12.25□□□□□ -0.45
P04436 PAX6-237ENST00000638696 1203 ntTSL 5 BASIC12.25□□□□□ -0.45
P04436 ERP29-202ENST00000455836 1333 ntTSL 2 BASIC12.25□□□□□ -0.45
P04436 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
P04436 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
P04436 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC12.25□□□□□ -0.45
P04436 USP20-202ENST00000358355 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
P04436 APEX1-201ENST00000216714 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
P04436 GRIA3-208ENST00000620581 2991 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
P04436 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
P04436 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC12.25□□□□□ -0.45
P04436 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
P04436 PROZ-201ENST00000342783 1551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
P04436 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
P04436 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms