Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 NAB1-203ENST00000409641 2472 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
RCL1Q9Y2P8 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
RCL1Q9Y2P8 ARAP1-209ENST00000455638 2683 ntTSL 5 BASIC11.04□□□□□ -0.64
RCL1Q9Y2P8 C2orf69-201ENST00000319974 3728 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
RCL1Q9Y2P8 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
RCL1Q9Y2P8 AL031666.1-201ENST00000413818 1809 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
RCL1Q9Y2P8 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
RCL1Q9Y2P8 CLDN19-201ENST00000296387 2859 ntTSL 2 BASIC11.04□□□□□ -0.64
RCL1Q9Y2P8 LPP-AS2-201ENST00000605573 2852 ntBASIC11.04□□□□□ -0.64
RCL1Q9Y2P8 SEPT9-201ENST00000329047 4453 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
RCL1Q9Y2P8 SMIM27-203ENST00000451672 2382 ntAPPRIS ALT2 BASIC11.04□□□□□ -0.64
RCL1Q9Y2P8 ADNP-203ENST00000396029 6261 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
RCL1Q9Y2P8 ZNF143-203ENST00000396602 2947 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
RCL1Q9Y2P8 ENOSF1-203ENST00000383578 4188 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
RCL1Q9Y2P8 C12orf74-201ENST00000397833 1856 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
RCL1Q9Y2P8 PGGHG-203ENST00000409548 3687 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
RCL1Q9Y2P8 Z97192.3-201ENST00000420902 2975 ntTSL 2 BASIC11.04□□□□□ -0.64
RCL1Q9Y2P8 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
RCL1Q9Y2P8 AC139491.6-202ENST00000637171 2077 ntBASIC11.04□□□□□ -0.64
RCL1Q9Y2P8 MST1R-215ENST00000621387 4449 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
RCL1Q9Y2P8 FARP1-201ENST00000319562 10262 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
RCL1Q9Y2P8 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC11.03□□□□□ -0.64
RCL1Q9Y2P8 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
RCL1Q9Y2P8 NFE2L1-222ENST00000585291 4390 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
RCL1Q9Y2P8 FOXD2-AS1-201ENST00000445551 2509 ntBASIC11.03□□□□□ -0.64
RCL1Q9Y2P8 PDE12-201ENST00000311180 8773 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
RCL1Q9Y2P8 TRIM25-202ENST00000537230 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
RCL1Q9Y2P8 AC067931.2-201ENST00000623655 2003 ntBASIC11.03□□□□□ -0.64
RCL1Q9Y2P8 CRBN-215ENST00000639284 2223 ntTSL 5 BASIC11.03□□□□□ -0.64
RCL1Q9Y2P8 TSNAXIP1-201ENST00000388833 2429 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
RCL1Q9Y2P8 SLC8A3-205ENST00000394330 2622 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
RCL1Q9Y2P8 HYOU1-217ENST00000612687 4360 ntTSL 5 BASIC11.03□□□□□ -0.64
RCL1Q9Y2P8 CDK16-201ENST00000276052 3016 ntTSL 2 BASIC11.03□□□□□ -0.64
RCL1Q9Y2P8 RASAL1-203ENST00000446861 3040 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
RCL1Q9Y2P8 IGF2BP2-204ENST00000457616 3426 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
RCL1Q9Y2P8 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
RCL1Q9Y2P8 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
RCL1Q9Y2P8 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
RCL1Q9Y2P8 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC11.03□□□□□ -0.64
RCL1Q9Y2P8 SERF2-206ENST00000409291 807 ntTSL 3 BASIC11.03□□□□□ -0.64
RCL1Q9Y2P8 PIN1P1-201ENST00000412108 996 ntBASIC11.03□□□□□ -0.64
RCL1Q9Y2P8 AC006987.1-201ENST00000413610 527 ntBASIC11.03□□□□□ -0.64
RCL1Q9Y2P8 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC11.03□□□□□ -0.64
RCL1Q9Y2P8 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC11.03□□□□□ -0.64
RCL1Q9Y2P8 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC11.03□□□□□ -0.64
RCL1Q9Y2P8 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC11.03□□□□□ -0.64
RCL1Q9Y2P8 AC007551.1-201ENST00000457394 519 ntBASIC11.03□□□□□ -0.64
RCL1Q9Y2P8 CD81-209ENST00000492627 886 ntTSL 3 BASIC11.03□□□□□ -0.64
RCL1Q9Y2P8 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC11.03□□□□□ -0.64
RCL1Q9Y2P8 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC11.03□□□□□ -0.64
RCL1Q9Y2P8 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC11.03□□□□□ -0.64
RCL1Q9Y2P8 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
RCL1Q9Y2P8 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC11.03□□□□□ -0.64
RCL1Q9Y2P8 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC11.03□□□□□ -0.64
RCL1Q9Y2P8 AL137779.3-201ENST00000553295 729 ntBASIC11.03□□□□□ -0.64
RCL1Q9Y2P8 AC093752.3-201ENST00000567343 901 ntBASIC11.03□□□□□ -0.64
RCL1Q9Y2P8 MIR3615-201ENST00000581999 87 ntBASIC11.03□□□□□ -0.64
RCL1Q9Y2P8 LINC02560-201ENST00000596379 459 ntBASIC11.03□□□□□ -0.64
RCL1Q9Y2P8 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
RCL1Q9Y2P8 SH2D2A-203ENST00000392306 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
RCL1Q9Y2P8 CDK5RAP1-201ENST00000339269 1891 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
RCL1Q9Y2P8 FAM225B-201ENST00000423546 5629 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
RCL1Q9Y2P8 HEY2-202ENST00000368365 2461 ntTSL 2 BASIC11.03□□□□□ -0.64
RCL1Q9Y2P8 SNX10-201ENST00000338523 2546 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
RCL1Q9Y2P8 PTGR2-204ENST00000555228 2543 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
RCL1Q9Y2P8 MPPE1-202ENST00000317235 2324 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
RCL1Q9Y2P8 CEACAM20-206ENST00000621342 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
RCL1Q9Y2P8 ELP4-202ENST00000379163 1700 ntTSL 2 BASIC11.03□□□□□ -0.64
RCL1Q9Y2P8 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
RCL1Q9Y2P8 NT5C3A-214ENST00000620705 1704 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
RCL1Q9Y2P8 ZNF318-201ENST00000361428 8006 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
RCL1Q9Y2P8 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC11.03□□□□□ -0.64
RCL1Q9Y2P8 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC11.03□□□□□ -0.64
RCL1Q9Y2P8 SLC17A9-202ENST00000370351 3580 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
RCL1Q9Y2P8 NR1D1-201ENST00000246672 2772 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
RCL1Q9Y2P8 SUCLG2-201ENST00000307227 2352 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
RCL1Q9Y2P8 PCDHAC1-201ENST00000253807 5299 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
RCL1Q9Y2P8 ZNF135-201ENST00000313434 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
RCL1Q9Y2P8 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
RCL1Q9Y2P8 SHMT2-205ENST00000553474 1765 ntTSL 2 BASIC11.03□□□□□ -0.64
RCL1Q9Y2P8 E2F3-203ENST00000613242 4094 ntTSL 5 BASIC11.03□□□□□ -0.64
RCL1Q9Y2P8 TGFBI-201ENST00000442011 2804 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
RCL1Q9Y2P8 MCM3AP-201ENST00000291688 6193 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
RCL1Q9Y2P8 KCNQ3-201ENST00000388996 11510 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
RCL1Q9Y2P8 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC11.03□□□□□ -0.64
RCL1Q9Y2P8 RBM8A-204ENST00000583313 4961 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
RCL1Q9Y2P8 MINK1-203ENST00000453408 3939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
RCL1Q9Y2P8 DCAF6-204ENST00000432587 3522 ntTSL 2 BASIC11.02□□□□□ -0.64
RCL1Q9Y2P8 INPP5D-204ENST00000445964 4845 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
RCL1Q9Y2P8 TMEM63B-201ENST00000259746 3318 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.64
RCL1Q9Y2P8 PDHA1-206ENST00000422285 3310 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
RCL1Q9Y2P8 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
RCL1Q9Y2P8 STK24-201ENST00000376547 2492 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
RCL1Q9Y2P8 MTHFR-202ENST00000376583 7044 ntAPPRIS ALT1 TSL 5 BASIC11.02□□□□□ -0.64
RCL1Q9Y2P8 PDHA1-213ENST00000545074 3391 ntAPPRIS ALT1 TSL 2 BASIC11.02□□□□□ -0.64
RCL1Q9Y2P8 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC11.02□□□□□ -0.64
RCL1Q9Y2P8 AP002754.1-201ENST00000506329 2349 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
RCL1Q9Y2P8 WASF2-202ENST00000618852 5676 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
RCL1Q9Y2P8 OLAH-203ENST00000378228 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
RCL1Q9Y2P8 ZNF221-205ENST00000622072 2102 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms