Protein–RNA interactions for Protein: P56539

CAV3, Caveolin-3, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAV3P56539 TRNAU1AP-201ENST00000373830 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CAV3P56539 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
CAV3P56539 GALT-201ENST00000378842 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CAV3P56539 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CAV3P56539 CPLX4-202ENST00000587244 1916 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CAV3P56539 LIG1-221ENST00000613670 3949 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CAV3P56539 CACNG3-201ENST00000005284 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CAV3P56539 ANKRA2-201ENST00000296785 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CAV3P56539 RNF34-203ENST00000392465 2051 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
CAV3P56539 AR-208ENST00000612452 10676 ntTSL 5 BASIC12.07□□□□□ -0.48
CAV3P56539 ZC3HAV1-201ENST00000242351 7100 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
CAV3P56539 ZNF461-201ENST00000360357 2361 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
CAV3P56539 AL356966.1-201ENST00000454752 2367 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CAV3P56539 AC008132.1-202ENST00000342005 1389 ntBASIC12.07□□□□□ -0.48
CAV3P56539 LRRC15-201ENST00000347624 5883 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CAV3P56539 KCNAB1-215ENST00000618897 4437 ntTSL 5 BASIC12.07□□□□□ -0.48
CAV3P56539 THPO-203ENST00000445696 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
CAV3P56539 TMEM182-202ENST00000409528 3112 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CAV3P56539 LINC00943-204ENST00000537374 1688 ntTSL 5 BASIC12.07□□□□□ -0.48
CAV3P56539 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC12.07□□□□□ -0.48
CAV3P56539 ZFYVE19-215ENST00000570108 1669 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
CAV3P56539 TSKU-203ENST00000527881 3554 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
CAV3P56539 PHC2-201ENST00000257118 3870 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
CAV3P56539 FAM90A17P-201ENST00000533716 1957 ntBASIC12.07□□□□□ -0.48
CAV3P56539 BDNF-202ENST00000356660 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CAV3P56539 SEC24B-201ENST00000265175 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
CAV3P56539 JAM3-201ENST00000299106 3912 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CAV3P56539 PNPLA6-204ENST00000545201 4502 ntTSL 2 BASIC12.07□□□□□ -0.48
CAV3P56539 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CAV3P56539 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CAV3P56539 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
CAV3P56539 JTB-202ENST00000356648 1040 ntTSL 2 BASIC12.07□□□□□ -0.48
CAV3P56539 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CAV3P56539 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CAV3P56539 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CAV3P56539 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
CAV3P56539 TXNRD1-202ENST00000388854 4277 ntTSL 5 BASIC12.07□□□□□ -0.48
CAV3P56539 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC12.07□□□□□ -0.48
CAV3P56539 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC12.07□□□□□ -0.48
CAV3P56539 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CAV3P56539 AC006033.1-201ENST00000440505 426 ntBASIC12.07□□□□□ -0.48
CAV3P56539 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC12.07□□□□□ -0.48
CAV3P56539 RPL18P13-201ENST00000478088 569 ntBASIC12.07□□□□□ -0.48
CAV3P56539 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC12.07□□□□□ -0.48
CAV3P56539 HLA-J-204ENST00000495278 958 ntBASIC12.07□□□□□ -0.48
CAV3P56539 AC108725.1-201ENST00000495472 409 ntBASIC12.07□□□□□ -0.48
CAV3P56539 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC12.07□□□□□ -0.48
CAV3P56539 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC12.07□□□□□ -0.48
CAV3P56539 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CAV3P56539 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CAV3P56539 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC12.07□□□□□ -0.48
CAV3P56539 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC12.07□□□□□ -0.48
CAV3P56539 AC008805.1-201ENST00000590892 364 ntBASIC12.07□□□□□ -0.48
CAV3P56539 AP001462.1-201ENST00000594089 452 ntBASIC12.07□□□□□ -0.48
CAV3P56539 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
CAV3P56539 AC011495.2-201ENST00000600665 360 ntTSL 5 BASIC12.07□□□□□ -0.48
CAV3P56539 AL139424.3-202ENST00000641619 917 ntBASIC12.07□□□□□ -0.48
CAV3P56539 SLC8B1-213ENST00000552014 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CAV3P56539 SLC5A11-202ENST00000424767 2399 ntTSL 2 BASIC12.07□□□□□ -0.48
CAV3P56539 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC12.07□□□□□ -0.48
CAV3P56539 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CAV3P56539 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
CAV3P56539 MYO7A-205ENST00000458637 7336 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CAV3P56539 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC12.07□□□□□ -0.48
CAV3P56539 SCNN1D-202ENST00000338555 3475 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
CAV3P56539 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
CAV3P56539 TSNAXIP1-201ENST00000388833 2429 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
CAV3P56539 FAM86C1-202ENST00000359244 2110 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
CAV3P56539 C10orf90-201ENST00000284694 3076 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
CAV3P56539 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
CAV3P56539 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CAV3P56539 CCDC163-203ENST00000626657 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
CAV3P56539 PISD-203ENST00000397500 2194 ntTSL 5 BASIC12.06□□□□□ -0.48
CAV3P56539 ESPNL-203ENST00000409506 3610 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CAV3P56539 EGFR-AS1-201ENST00000442411 2806 ntTSL 2 BASIC12.06□□□□□ -0.48
CAV3P56539 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CAV3P56539 LDB3-205ENST00000429277 5436 ntTSL 2 BASIC12.06□□□□□ -0.48
CAV3P56539 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CAV3P56539 API5-208ENST00000531273 1868 ntTSL 2 BASIC12.06□□□□□ -0.48
CAV3P56539 AL450468.2-201ENST00000565955 1889 ntBASIC12.06□□□□□ -0.48
CAV3P56539 ZEB2-246ENST00000638128 8932 ntTSL 5 BASIC12.06□□□□□ -0.48
CAV3P56539 CICP19-201ENST00000632944 2357 ntBASIC12.06□□□□□ -0.48
CAV3P56539 TP53I11-203ENST00000395648 3381 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
CAV3P56539 ARL4A-203ENST00000396663 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CAV3P56539 AL449403.1-201ENST00000432783 1577 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CAV3P56539 KRT78-202ENST00000359499 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
CAV3P56539 UBTF-209ENST00000529383 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CAV3P56539 PLK4-210ENST00000514379 3060 ntTSL 2 BASIC12.06□□□□□ -0.48
CAV3P56539 SPRED2-201ENST00000356388 4097 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CAV3P56539 PRIMPOL-201ENST00000314970 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
CAV3P56539 GPR173-201ENST00000332582 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CAV3P56539 GPN1-211ENST00000610189 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
CAV3P56539 PASK-203ENST00000403638 5161 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CAV3P56539 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
CAV3P56539 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CAV3P56539 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CAV3P56539 SH3BGRL3-202ENST00000319041 768 ntTSL 2 BASIC12.06□□□□□ -0.48
CAV3P56539 FAM86MP-201ENST00000340703 885 ntBASIC12.06□□□□□ -0.48
CAV3P56539 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CAV3P56539 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms