Protein–RNA interactions for Protein: P08908

HTR1A, 5-hydroxytryptamine receptor 1A, humanhuman

Predictions only

Length 422 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1AP08908 PPP4R1-202ENST00000400555 3885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
HTR1AP08908 DNAJB12-204ENST00000461919 2369 ntTSL 2 BASIC12.27□□□□□ -0.44
HTR1AP08908 STRADA-204ENST00000392950 2778 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
HTR1AP08908 CLINT1-206ENST00000523094 3987 ntTSL 2 BASIC12.27□□□□□ -0.44
HTR1AP08908 MAGI1-217ENST00000611645 6398 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
HTR1AP08908 KCNH7-201ENST00000328032 2434 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
HTR1AP08908 ZFP69B-201ENST00000361584 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
HTR1AP08908 SRSF5-201ENST00000394366 1638 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
HTR1AP08908 AL162231.4-201ENST00000564224 3264 ntTSL 2 BASIC12.27□□□□□ -0.45
HTR1AP08908 ELP4-212ENST00000638764 2456 ntTSL 5 BASIC12.27□□□□□ -0.45
HTR1AP08908 BAHCC1-201ENST00000307745 10342 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
HTR1AP08908 CCDC33-201ENST00000268082 2093 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
HTR1AP08908 MARCH3-201ENST00000308660 4196 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
HTR1AP08908 CYP4F12-201ENST00000324632 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
HTR1AP08908 DDC-212ENST00000615193 1674 ntTSL 3 BASIC12.27□□□□□ -0.45
HTR1AP08908 AIF1L-201ENST00000247291 3364 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
HTR1AP08908 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
HTR1AP08908 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
HTR1AP08908 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
HTR1AP08908 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
HTR1AP08908 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC12.27□□□□□ -0.45
HTR1AP08908 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC12.27□□□□□ -0.45
HTR1AP08908 AL365203.1-201ENST00000450890 1048 ntTSL 3 BASIC12.27□□□□□ -0.45
HTR1AP08908 KLF2P4-201ENST00000451959 1225 ntBASIC12.27□□□□□ -0.45
HTR1AP08908 CTBP2P5-201ENST00000454986 1264 ntBASIC12.27□□□□□ -0.45
HTR1AP08908 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
HTR1AP08908 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
HTR1AP08908 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
HTR1AP08908 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC12.27□□□□□ -0.45
HTR1AP08908 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
HTR1AP08908 AL596325.1-201ENST00000563991 1082 ntBASIC12.27□□□□□ -0.45
HTR1AP08908 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC12.27□□□□□ -0.45
HTR1AP08908 AP000346.4-201ENST00000614827 381 ntBASIC12.27□□□□□ -0.45
HTR1AP08908 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
HTR1AP08908 AC079336.7-201ENST00000623428 1078 ntBASIC12.27□□□□□ -0.45
HTR1AP08908 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
HTR1AP08908 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
HTR1AP08908 BCL2L11-217ENST00000610735 5120 ntTSL 5 BASIC12.27□□□□□ -0.45
HTR1AP08908 CDKL2-201ENST00000307465 2565 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
HTR1AP08908 GPC3-201ENST00000370818 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
HTR1AP08908 COPS7A-201ENST00000229251 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
HTR1AP08908 FAM157A-203ENST00000634862 6083 ntTSL 5 BASIC12.27□□□□□ -0.45
HTR1AP08908 CHD4-211ENST00000544484 6554 ntTSL 2 BASIC12.27□□□□□ -0.45
HTR1AP08908 SPACA6P-AS-201ENST00000602324 3962 ntTSL 2 BASIC12.27□□□□□ -0.45
HTR1AP08908 CXCR5-201ENST00000292174 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
HTR1AP08908 DNMT3B-203ENST00000348286 4048 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
HTR1AP08908 PNMA5-201ENST00000361887 3197 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
HTR1AP08908 PHF20-203ENST00000374012 5922 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
HTR1AP08908 AIFM1P1-201ENST00000413342 1841 ntBASIC12.27□□□□□ -0.45
HTR1AP08908 MKL1-212ENST00000618417 1842 ntTSL 5 BASIC12.27□□□□□ -0.45
HTR1AP08908 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
HTR1AP08908 SPATA13-203ENST00000382108 8463 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
HTR1AP08908 ACO2-202ENST00000396512 2811 ntTSL 5 BASIC12.27□□□□□ -0.45
HTR1AP08908 DPYSL5-201ENST00000288699 5209 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
HTR1AP08908 TCF3-202ENST00000344749 4289 ntTSL 5 BASIC12.27□□□□□ -0.45
HTR1AP08908 APOL2-203ENST00000451256 1421 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
HTR1AP08908 ACOX2-201ENST00000302819 2426 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
HTR1AP08908 AFF2-202ENST00000342251 7313 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
HTR1AP08908 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
HTR1AP08908 ERCC6L2-201ENST00000288985 4564 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
HTR1AP08908 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
HTR1AP08908 PACSIN1-207ENST00000620693 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
HTR1AP08908 ST5-230ENST00000530438 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
HTR1AP08908 ARL4A-203ENST00000396663 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
HTR1AP08908 DLC1-210ENST00000512044 3758 ntTSL 2 BASIC12.26□□□□□ -0.45
HTR1AP08908 C17orf53-202ENST00000319977 2725 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
HTR1AP08908 TMEM18-201ENST00000281017 2762 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
HTR1AP08908 C12orf56-201ENST00000333722 3936 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
HTR1AP08908 C1S-221ENST00000617865 2844 ntTSL 5 BASIC12.26□□□□□ -0.45
HTR1AP08908 LITAF-203ENST00000413364 2292 ntTSL 2 BASIC12.26□□□□□ -0.45
HTR1AP08908 BCAS4-202ENST00000371608 6680 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
HTR1AP08908 ANKZF1-203ENST00000410034 2486 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
HTR1AP08908 SPTLC1-201ENST00000262554 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
HTR1AP08908 PSG8-AS1-201ENST00000425668 1873 ntTSL 2 BASIC12.26□□□□□ -0.45
HTR1AP08908 PKM-222ENST00000568883 1863 ntTSL 5 BASIC12.26□□□□□ -0.45
HTR1AP08908 CILP-201ENST00000261883 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
HTR1AP08908 ZNF283-209ENST00000618787 5713 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
HTR1AP08908 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
HTR1AP08908 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
HTR1AP08908 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC12.26□□□□□ -0.45
HTR1AP08908 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC12.26□□□□□ -0.45
HTR1AP08908 AC005722.1-201ENST00000431878 964 ntBASIC12.26□□□□□ -0.45
HTR1AP08908 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC12.26□□□□□ -0.45
HTR1AP08908 NUP58-206ENST00000463407 6360 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
HTR1AP08908 AC021723.1-201ENST00000486306 515 ntBASIC12.26□□□□□ -0.45
HTR1AP08908 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
HTR1AP08908 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC12.26□□□□□ -0.45
HTR1AP08908 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC12.26□□□□□ -0.45
HTR1AP08908 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
HTR1AP08908 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC12.26□□□□□ -0.45
HTR1AP08908 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
HTR1AP08908 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC12.26□□□□□ -0.45
HTR1AP08908 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
HTR1AP08908 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC12.26□□□□□ -0.45
HTR1AP08908 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
HTR1AP08908 C14orf159-203ENST00000412671 2591 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
HTR1AP08908 PRKCQ-203ENST00000539722 3224 ntTSL 2 BASIC12.26□□□□□ -0.45
HTR1AP08908 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC12.26□□□□□ -0.45
HTR1AP08908 EEF2K-201ENST00000263026 7388 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
HTR1AP08908 SCML1-204ENST00000398080 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms