Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 DDR1-262ENST00000508312 3073 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
TPM3P06753 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TPM3P06753 DPP3-211ENST00000532677 3078 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TPM3P06753 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC15.13■□□□□ 0.01
TPM3P06753 AL596325.1-201ENST00000563991 1082 ntBASIC15.13■□□□□ 0.01
TPM3P06753 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC15.13■□□□□ 0.01
TPM3P06753 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC15.13■□□□□ 0.01
TPM3P06753 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC15.13■□□□□ 0.01
TPM3P06753 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TPM3P06753 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TPM3P06753 EFHC1-224ENST00000636702 2197 ntTSL 5 BASIC15.13■□□□□ 0.01
TPM3P06753 MTHFR-202ENST00000376583 7044 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
TPM3P06753 ZNF529-209ENST00000591340 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TPM3P06753 GNAS-214ENST00000371100 4029 ntTSL 5 BASIC15.13■□□□□ 0.01
TPM3P06753 ANKRA2-201ENST00000296785 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TPM3P06753 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
TPM3P06753 PCDHA10-202ENST00000506939 3788 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TPM3P06753 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TPM3P06753 PLA2G15-201ENST00000219345 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TPM3P06753 FAS-204ENST00000355740 2563 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
TPM3P06753 CTAGE7P-201ENST00000435712 2436 ntBASIC15.13■□□□□ 0.01
TPM3P06753 IL12A-AS1-203ENST00000497452 2425 ntTSL 2 BASIC15.13■□□□□ 0.01
TPM3P06753 UAP1L1-201ENST00000360271 3201 ntTSL 2 BASIC15.13■□□□□ 0.01
TPM3P06753 AL391845.2-201ENST00000443930 1954 ntTSL 2 BASIC15.13■□□□□ 0.01
TPM3P06753 NAPB-207ENST00000617876 3883 ntAPPRIS ALT1 TSL 2 BASIC15.13■□□□□ 0.01
TPM3P06753 POLL-203ENST00000370162 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TPM3P06753 PDXK-201ENST00000291565 7366 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TPM3P06753 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC15.13■□□□□ 0.01
TPM3P06753 CADM1-206ENST00000537058 3550 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TPM3P06753 IQSEC1-204ENST00000613206 3582 ntTSL 2 BASIC15.13■□□□□ 0.01
TPM3P06753 PDZD4-209ENST00000544474 3418 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TPM3P06753 KCNV1-202ENST00000524391 6979 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TPM3P06753 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TPM3P06753 MCM4-215ENST00000523944 4105 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
TPM3P06753 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TPM3P06753 TOLLIP-207ENST00000527886 3666 ntTSL 2 BASIC15.12■□□□□ 0.01
TPM3P06753 HSP90AA1-202ENST00000334701 3510 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TPM3P06753 GFRA1-203ENST00000369236 9109 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
TPM3P06753 KCNMA1-241ENST00000638606 3852 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
TPM3P06753 KCNMA1-279ENST00000640182 3852 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
TPM3P06753 ADD1-207ENST00000446856 3745 ntTSL 5 BASIC15.12■□□□□ 0.01
TPM3P06753 RPL23A-204ENST00000422514 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TPM3P06753 TNFAIP3-206ENST00000612899 4735 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
TPM3P06753 AC015818.9-201ENST00000591705 4582 ntBASIC15.12■□□□□ 0.01
TPM3P06753 MED16-204ENST00000395808 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TPM3P06753 AC073335.2-201ENST00000610177 3441 ntBASIC15.12■□□□□ 0.01
TPM3P06753 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
TPM3P06753 ALOX5-208ENST00000612635 1945 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TPM3P06753 SH3RF2-206ENST00000511217 5607 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TPM3P06753 IQUB-202ENST00000466202 3296 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TPM3P06753 FMNL1-202ENST00000331495 4101 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TPM3P06753 LINC01987-201ENST00000593118 2281 ntTSL 2 BASIC15.12■□□□□ 0.01
TPM3P06753 SLC26A6-207ENST00000420764 2630 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TPM3P06753 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TPM3P06753 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TPM3P06753 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
TPM3P06753 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TPM3P06753 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
TPM3P06753 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC15.12■□□□□ 0.01
TPM3P06753 RPS9P1-201ENST00000419943 583 ntBASIC15.12■□□□□ 0.01
TPM3P06753 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TPM3P06753 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC15.12■□□□□ 0.01
TPM3P06753 RNMTL1P1-201ENST00000454103 560 ntBASIC15.12■□□□□ 0.01
TPM3P06753 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC15.12■□□□□ 0.01
TPM3P06753 COQ10BP2-201ENST00000513804 724 ntBASIC15.12■□□□□ 0.01
TPM3P06753 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TPM3P06753 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TPM3P06753 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC15.12■□□□□ 0.01
TPM3P06753 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC15.12■□□□□ 0.01
TPM3P06753 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC15.12■□□□□ 0.01
TPM3P06753 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC15.12■□□□□ 0.01
TPM3P06753 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC15.12■□□□□ 0.01
TPM3P06753 PCBP2-OT1-201ENST00000634357 590 ntBASIC15.12■□□□□ 0.01
TPM3P06753 C1GALT1-205ENST00000436587 6235 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
TPM3P06753 KLHL23-202ENST00000392647 4077 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TPM3P06753 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TPM3P06753 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
TPM3P06753 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TPM3P06753 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
TPM3P06753 FN1-202ENST00000336916 8435 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TPM3P06753 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
TPM3P06753 AC007336.3-201ENST00000623886 2160 ntBASIC15.12■□□□□ 0.01
TPM3P06753 LPP-AS2-201ENST00000605573 2852 ntBASIC15.12■□□□□ 0.01
TPM3P06753 FAM105A-201ENST00000274217 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TPM3P06753 ENOX2-201ENST00000338144 4263 ntTSL 2 BASIC15.12■□□□□ 0.01
TPM3P06753 ZNF473-205ENST00000595661 4828 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
TPM3P06753 ZNF25-201ENST00000302609 4139 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TPM3P06753 KDM2B-219ENST00000611216 3434 ntTSL 5 BASIC15.12■□□□□ 0.01
TPM3P06753 C5orf15-201ENST00000231512 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TPM3P06753 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TPM3P06753 MYO19-203ENST00000610930 3271 ntTSL 5 BASIC15.12■□□□□ 0.01
TPM3P06753 SLC6A1-201ENST00000287766 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TPM3P06753 GREM2-201ENST00000318160 4170 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TPM3P06753 NOL4L-203ENST00000359676 5991 ntTSL 2 BASIC15.12■□□□□ 0.01
TPM3P06753 SEMA6A-202ENST00000343348 6878 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TPM3P06753 ARHGAP30-201ENST00000368013 4394 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
TPM3P06753 SLC25A25-205ENST00000432073 3678 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TPM3P06753 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
TPM3P06753 POLR1B-201ENST00000263331 4558 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
TPM3P06753 MYBPC3-204ENST00000545968 4226 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms