Protein–RNA interactions for Protein: P26368

U2AF2, Splicing factor U2AF 65 kDa subunit, humanhuman

Known RBP eCLIP

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2P26368 HOXB3-213ENST00000552000 466 ntTSL 35.87□□□□□ -1.472e-8■□□□□ 10
U2AF2P26368 HOXB3-203ENST00000464266 595 ntTSL 34.29□□□□□ -1.722e-8■□□□□ 10
U2AF2P26368 NUTM2A-AS1-202ENST00000413722 732 ntTSL 218.13■□□□□ 0.498e-7■□□□□ 10
U2AF2P26368 NUTM2A-AS1-210ENST00000451940 662 ntTSL 517.04■□□□□ 0.328e-7■□□□□ 10
U2AF2P26368 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC16.98■□□□□ 0.318e-7■□□□□ 10
U2AF2P26368 NUTM2A-AS1-208ENST00000446751 2394 ntTSL 2 BASIC15.38■□□□□ 0.058e-7■□□□□ 10
U2AF2P26368 NUTM2A-AS1-207ENST00000433920 876 ntTSL 314.86□□□□□ -0.038e-7■□□□□ 10
U2AF2P26368 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC7.24□□□□□ -1.258e-7■□□□□ 10
U2AF2P26368 TRMT61B-205ENST00000490390 573 ntTSL 34.66□□□□□ -1.669e-7■□□□□ 10
U2AF2P26368 TRMT61B-204ENST00000484060 351 ntTSL 54.4□□□□□ -1.719e-7■□□□□ 10
U2AF2P26368 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.4□□□□□ -1.878e-7■□□□□ 10
U2AF2P26368 NUTM2A-AS1-206ENST00000433530 401 ntTSL 32.91□□□□□ -1.948e-7■□□□□ 10
U2AF2P26368 MAPK8IP3-213ENST00000568271 752 ntTSL 516.21■□□□□ 0.194e-25■□□□□ 10
U2AF2P26368 PPIG-205ENST00000418888 525 ntTSL 415.29■□□□□ 0.043e-8■□□□□ 10
U2AF2P26368 PAH-212ENST00000551337 675 ntTSL 320.88■□□□□ 0.932e-18■□□□□ 10
U2AF2P26368 PAH-210ENST00000550978 652 ntTSL 23.49□□□□□ -1.852e-18■□□□□ 10
U2AF2P26368 OGT-205ENST00000459760 541 ntTSL 53.03□□□□□ -1.926e-7■□□□□ 10
U2AF2P26368 UBR3-207ENST00000465630 576 ntTSL 40.16□□□□□ -2.381e-7■□□□□ 10
U2AF2P26368 REV3L-211ENST00000470871 386 ntTSL 34.04□□□□□ -1.763e-10■□□□□ 10
U2AF2P26368 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.286e-15■□□□□ 10
U2AF2P26368 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.269e-6■□□□□ 10
U2AF2P26368 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.839e-6■□□□□ 10
U2AF2P26368 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.579e-6■□□□□ 10
U2AF2P26368 RHOA-206ENST00000454011 889 ntTSL 2 BASIC17.77■□□□□ 0.446e-15■□□□□ 10
U2AF2P26368 PNP-202ENST00000553418 557 ntTSL 317.1■□□□□ 0.332e-10■□□□□ 10
U2AF2P26368 PNP-201ENST00000361505 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.092e-10■□□□□ 10
U2AF2P26368 PNP-208ENST00000557229 992 ntTSL 1 (best)13.9□□□□□ -0.182e-10■□□□□ 10
U2AF2P26368 WBP11-201ENST00000261167 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.229e-6■□□□□ 10
U2AF2P26368 BRD8-218ENST00000471892 687 ntTSL 313.1□□□□□ -0.319e-6■□□□□ 10
U2AF2P26368 RNF19A-212ENST00000523255 793 ntTSL 312.9□□□□□ -0.349e-6■□□□□ 10
U2AF2P26368 PNP-204ENST00000554056 1635 ntTSL 512.15□□□□□ -0.462e-10■□□□□ 10
U2AF2P26368 RHOA-203ENST00000422781 961 ntTSL 2 BASIC11.87□□□□□ -0.516e-15■□□□□ 10
U2AF2P26368 BRD8-213ENST00000453824 561 ntTSL 510.81□□□□□ -0.689e-6■□□□□ 10
U2AF2P26368 PNP-207ENST00000556754 2573 ntTSL 210.65□□□□□ -0.712e-10■□□□□ 10
U2AF2P26368 PPP4R1-210ENST00000578557 571 ntTSL 49.67□□□□□ -0.862e-10■□□□□ 10
U2AF2P26368 SRRM1-204ENST00000461768 496 ntTSL 39.59□□□□□ -0.872e-10■□□□□ 10
U2AF2P26368 SRRM1-214ENST00000485541 679 ntTSL 59.18□□□□□ -0.942e-10■□□□□ 10
U2AF2P26368 SRRM1-220ENST00000496882 834 ntTSL 58.66□□□□□ -1.022e-10■□□□□ 10
U2AF2P26368 PNP-205ENST00000554065 554 ntTSL 47.8□□□□□ -1.162e-10■□□□□ 10
U2AF2P26368 WBP11-203ENST00000535638 787 ntTSL 57.76□□□□□ -1.179e-6■□□□□ 10
U2AF2P26368 PNP-203ENST00000553591 770 ntTSL 57.59□□□□□ -1.192e-10■□□□□ 10
U2AF2P26368 RBM5-215ENST00000471995 762 ntTSL 35.77□□□□□ -1.499e-6■□□□□ 10
U2AF2P26368 SRRM1-215ENST00000488317 333 ntTSL 24.14□□□□□ -1.752e-10■□□□□ 10
U2AF2P26368 LINC01578-205ENST00000555227 1078 ntTSL 52.5□□□□□ -2.012e-11■□□□□ 10
U2AF2P26368 PPP4R1-227ENST00000583988 582 ntTSL 32.17□□□□□ -2.062e-10■□□□□ 10
U2AF2P26368 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC19.98■□□□□ 0.793e-6■□□□□ 10
U2AF2P26368 ERCC5-201ENST00000355739 5082 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.123e-6■□□□□ 10
U2AF2P26368 BIVM-ERCC5-202ENST00000638434 615 ntTSL 51.31□□□□□ -2.23e-6■□□□□ 10
U2AF2P26368 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.333e-6■□□□□ 10
U2AF2P26368 KIAA0141-205ENST00000507481 1342 ntTSL 513.55□□□□□ -0.243e-6■□□□□ 10
U2AF2P26368 KIAA0141-202ENST00000432126 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.63e-6■□□□□ 10
U2AF2P26368 TRAP1-203ENST00000570403 521 ntTSL 425.34■■□□□ 1.652e-8■□□□□ 10
U2AF2P26368 TRAP1-205ENST00000571011 480 ntTSL 523.58■■□□□ 1.372e-8■□□□□ 10
U2AF2P26368 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.732e-7■□□□□ 10
U2AF2P26368 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.582e-7■□□□□ 10
U2AF2P26368 PSPH-210ENST00000437355 1409 ntTSL 515.74■□□□□ 0.112e-7■□□□□ 10
U2AF2P26368 PSPH-211ENST00000459834 692 ntTSL 311.19□□□□□ -0.622e-7■□□□□ 10
U2AF2P26368 ACSL3-205ENST00000421680 639 ntTSL 33.07□□□□□ -1.924e-7■□□□□ 10
U2AF2P26368 TOX3-205ENST00000568436 548 ntTSL 321.06■□□□□ 0.962e-7■□□□□ 10
U2AF2P26368 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.99□□□□□ -1.777e-8■□□□□ 9.9
U2AF2P26368 TNFRSF21-201ENST00000296861 3595 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.126e-9■□□□□ 9.9
U2AF2P26368 ZC3H8-204ENST00000466259 565 ntTSL 23.66□□□□□ -1.828e-9■□□□□ 9.9
U2AF2P26368 USP34-221ENST00000494867 795 ntTSL 312.97□□□□□ -0.333e-7■□□□□ 9.9
U2AF2P26368 USP34-215ENST00000484179 927 ntTSL 34.89□□□□□ -1.633e-7■□□□□ 9.9
U2AF2P26368 MALAT1-216ENST00000620465 333 ntTSL 22.39□□□□□ -2.031e-323■□□□□ 9.9
U2AF2P26368 MLLT6-209ENST00000620482 1556 ntTSL 1 (best)20.2■□□□□ 0.827e-34■□□□□ 9.9
U2AF2P26368 PTP4A1-207ENST00000639568 532 ntTSL 512.07□□□□□ -0.482e-69■□□□□ 9.9
U2AF2P26368 WDR45B-203ENST00000571817 889 ntTSL 322.74■■□□□ 1.231e-8■□□□□ 9.9
U2AF2P26368 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.761e-8■□□□□ 9.9
U2AF2P26368 WDR45B-208ENST00000574828 765 ntTSL 317.58■□□□□ 0.41e-8■□□□□ 9.9
U2AF2P26368 WDR45B-205ENST00000572583 2322 ntTSL 1 (best)17.38■□□□□ 0.371e-8■□□□□ 9.9
U2AF2P26368 WDR45B-206ENST00000573616 896 ntTSL 515.61■□□□□ 0.091e-8■□□□□ 9.9
U2AF2P26368 WDR45B-204ENST00000571835 869 ntTSL 59.98□□□□□ -0.811e-8■□□□□ 9.9
U2AF2P26368 FAM13B-210ENST00000513640 516 ntTSL 52.7□□□□□ -1.981e-8■□□□□ 9.9
U2AF2P26368 PDCD4-206ENST00000481353 1120 ntTSL 29.59□□□□□ -0.871e-11■□□□□ 9.9
U2AF2P26368 PDCD4-204ENST00000462577 789 ntTSL 55.87□□□□□ -1.471e-11■□□□□ 9.9
U2AF2P26368 CPNE1-212ENST00000430570 1332 ntTSL 528.53■■■□□ 2.163e-26■□□□□ 9.9
U2AF2P26368 CPNE1-207ENST00000414664 1070 ntTSL 528.5■■■□□ 2.153e-26■□□□□ 9.9
U2AF2P26368 RBM12-204ENST00000424458 1068 ntTSL 228.5■■■□□ 2.153e-26■□□□□ 9.9
U2AF2P26368 CPNE1-217ENST00000439669 784 ntTSL 526.89■■□□□ 1.93e-26■□□□□ 9.9
U2AF2P26368 CPNE1-223ENST00000475146 627 ntTSL 326.89■■□□□ 1.93e-26■□□□□ 9.9
U2AF2P26368 CPNE1-211ENST00000420363 821 ntTSL 224.03■■□□□ 1.443e-26■□□□□ 9.9
U2AF2P26368 CPNE1-220ENST00000458038 596 ntTSL 323.62■■□□□ 1.373e-26■□□□□ 9.9
U2AF2P26368 CPNE1-219ENST00000440240 746 ntTSL 522.85■■□□□ 1.253e-26■□□□□ 9.9
U2AF2P26368 CPNE1-210ENST00000416778 744 ntTSL 219.89■□□□□ 0.773e-26■□□□□ 9.9
U2AF2P26368 CPNE1-213ENST00000434795 831 ntTSL 319.89■□□□□ 0.773e-26■□□□□ 9.9
U2AF2P26368 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.463e-26■□□□□ 9.9
U2AF2P26368 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC17.63■□□□□ 0.413e-26■□□□□ 9.9
U2AF2P26368 CPNE1-208ENST00000414711 673 ntTSL 517.29■□□□□ 0.363e-26■□□□□ 9.9
U2AF2P26368 CPNE1-215ENST00000437100 826 ntTSL 516.85■□□□□ 0.293e-26■□□□□ 9.9
U2AF2P26368 CPNE1-206ENST00000412056 998 ntTSL 315.81■□□□□ 0.123e-26■□□□□ 9.9
U2AF2P26368 RBM12-202ENST00000374104 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.13e-26■□□□□ 9.9
U2AF2P26368 RBM12-206ENST00000435161 565 ntTSL 413.93□□□□□ -0.183e-26■□□□□ 9.9
U2AF2P26368 RBM12-205ENST00000431148 583 ntTSL 413.17□□□□□ -0.33e-26■□□□□ 9.9
U2AF2P26368 CPNE1-218ENST00000439806 748 ntTSL 512.05□□□□□ -0.483e-26■□□□□ 9.9
U2AF2P26368 CPNE1-214ENST00000435747 400 ntTSL 311.42□□□□□ -0.583e-26■□□□□ 9.9
U2AF2P26368 AL109827.1-202ENST00000441563 611 ntAPPRIS ALT2 TSL 211.27□□□□□ -0.613e-26■□□□□ 9.9
U2AF2P26368 AL109827.1-201ENST00000454607 679 ntAPPRIS ALT2 TSL 211.27□□□□□ -0.613e-26■□□□□ 9.9
U2AF2P26368 RBM12-203ENST00000374114 6662 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.783e-26■□□□□ 9.9
U2AF2P26368 RGL2-241ENST00000476616 1141 ntTSL 517.63■□□□□ 0.416e-6■□□□□ 9.9
Retrieved 100 of 36,523 protein–RNA pairs in 327 ms