RNA–Protein interactions for RNA: ENST00000465630.1

UBR3-207, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-207ENST00000465630 AEBP2Q6ZN18 517 aaPredicted RBP24.01■■□□□ 1.43
UBR3-207ENST00000465630 CHIC1Q5VXU3 224 aa22.83■■□□□ 1.25
UBR3-207ENST00000465630 SENP3Q9H4L4 574 aaPredicted RBP20.38■□□□□ 0.85
UBR3-207ENST00000465630 PHF23Q9BUL5 403 aaPredicted RBP20.16■□□□□ 0.82
UBR3-207ENST00000465630 FOXD1Q16676 465 aa19.04■□□□□ 0.64
UBR3-207ENST00000465630 PLPPR3Q6T4P5 718 aa18.25■□□□□ 0.51
UBR3-207ENST00000465630 PPP6R1Q9UPN7 881 aa17.91■□□□□ 0.46
UBR3-207ENST00000465630 ADRA2BP18089 450 aa17.84■□□□□ 0.45
UBR3-207ENST00000465630 PIAS4Q8N2W9 510 aaPredicted RBP17.78■□□□□ 0.44
UBR3-207ENST00000465630 MSH5O43196 834 aa17.71■□□□□ 0.43
UBR3-207ENST00000465630 POTEDQ86YR6 584 aa17.2■□□□□ 0.34
UBR3-207ENST00000465630 MAPK8IP2Q13387 824 aaPredicted RBP16.37■□□□□ 0.21
UBR3-207ENST00000465630 SCAF1Q9H7N4 1312 aaKnown RBP16.2■□□□□ 0.18
UBR3-207ENST00000465630 DMRT2Q9Y5R5 561 aa16.2■□□□□ 0.18
UBR3-207ENST00000465630 PPP4R3CPQ6ZMV5 832 aa16.04■□□□□ 0.16
UBR3-207ENST00000465630 CNKSR2Q8WXI2 1034 aa15.69■□□□□ 0.1
UBR3-207ENST00000465630 HOXD11P31277 338 aaPredicted RBP15.63■□□□□ 0.09
UBR3-207ENST00000465630 RNF216Q9NWF9 866 aaPredicted RBP15.53■□□□□ 0.08
UBR3-207ENST00000465630 DCAF8L1A6NGE4 600 aa15.52■□□□□ 0.08
UBR3-207ENST00000465630 NCBP3Q53F19 620 aaKnown RBP15.39■□□□□ 0.05
UBR3-207ENST00000465630 NPM3O75607 178 aaKnown RBP15.26■□□□□ 0.03
UBR3-207ENST00000465630 RNF39Q9H2S5 420 aa15.17■□□□□ 0.02
UBR3-207ENST00000465630 CACNB1Q02641 598 aaPredicted RBP15.16■□□□□ 0.02
UBR3-207ENST00000465630 KCNA4P22459 653 aa15.06■□□□□ 0
UBR3-207ENST00000465630 DNAJC5BQ9UF47 199 aa15.03■□□□□ -0
UBR3-207ENST00000465630 C1QBPQ07021 282 aaKnown RBP14.91□□□□□ -0.02
UBR3-207ENST00000465630 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.88□□□□□ -0.03
UBR3-207ENST00000465630 U3KPZ7 1027 aaPredicted RBP14.63□□□□□ -0.07
UBR3-207ENST00000465630 SLC4A2P04920 1241 aa14.56□□□□□ -0.08
UBR3-207ENST00000465630 SPINK5Q9NQ38 1064 aaPredicted RBP14.4□□□□□ -0.1
UBR3-207ENST00000465630 CAPN15O75808 1086 aa14.32□□□□□ -0.12
UBR3-207ENST00000465630 DSG3P32926 999 aa14.23□□□□□ -0.13
UBR3-207ENST00000465630 SLC4A1APQ9BWU0 796 aaKnown RBP14.19□□□□□ -0.14
UBR3-207ENST00000465630 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.14□□□□□ -0.15
UBR3-207ENST00000465630 HNRNPUL2Q1KMD3 747 aaKnown RBP14.14□□□□□ -0.15
UBR3-207ENST00000465630 TRHP20396 242 aaPredicted RBP14.12□□□□□ -0.15
UBR3-207ENST00000465630 APLP2Q06481 763 aa14.11□□□□□ -0.15
UBR3-207ENST00000465630 SAMD1Q6SPF0 538 aaPredicted RBP14.09□□□□□ -0.15
UBR3-207ENST00000465630 MYCNP04198 464 aaPredicted RBP14.06□□□□□ -0.16
UBR3-207ENST00000465630 ZNF219Q9P2Y4 722 aaPredicted RBP14.06□□□□□ -0.16
UBR3-207ENST00000465630 ABCB7O75027 752 aa14.05□□□□□ -0.16
UBR3-207ENST00000465630 FOXD4L1Q9NU39 408 aa13.97□□□□□ -0.17
UBR3-207ENST00000465630 ZBTB22O15209 634 aa13.89□□□□□ -0.19
UBR3-207ENST00000465630 ATF5Q9Y2D1 282 aaPredicted RBP13.81□□□□□ -0.2
UBR3-207ENST00000465630 POLA2Q14181 598 aa13.77□□□□□ -0.21
UBR3-207ENST00000465630 RBM42Q9BTD8 480 aaKnown RBP13.51□□□□□ -0.25
UBR3-207ENST00000465630 ATXN8OSP0DMR3 200 aa13.5□□□□□ -0.25
UBR3-207ENST00000465630 POTEHQ6S545 545 aa13.47□□□□□ -0.25
UBR3-207ENST00000465630 ZBTB12Q9Y330 459 aaPredicted RBP13.44□□□□□ -0.26
UBR3-207ENST00000465630 OSCARQ8IYS5 282 aa13.35□□□□□ -0.27
UBR3-207ENST00000465630 CSRNP3Q8WYN3 585 aa13.29□□□□□ -0.28
UBR3-207ENST00000465630 AKT1S1Q96B36 256 aa13.25□□□□□ -0.29
UBR3-207ENST00000465630 CHRDL2Q6WN34 429 aa13.23□□□□□ -0.29
UBR3-207ENST00000465630 MKRN4PQ13434 485 aaPredicted RBP13.18□□□□□ -0.3
UBR3-207ENST00000465630 EHMT2Q96KQ7 1210 aa13.18□□□□□ -0.3
UBR3-207ENST00000465630 FBLN2P98095 1184 aa13.16□□□□□ -0.3
UBR3-207ENST00000465630 REM2Q8IYK8 340 aaPredicted RBP13.16□□□□□ -0.3
UBR3-207ENST00000465630 SPDYE2BA6NHP3 402 aa13.06□□□□□ -0.32
UBR3-207ENST00000465630 SPDYE6P0CI01 402 aa13.06□□□□□ -0.32
UBR3-207ENST00000465630 SPDYE2Q495Y8 402 aa13.06□□□□□ -0.32
UBR3-207ENST00000465630 PITPNM1O00562 1244 aa13.04□□□□□ -0.32
UBR3-207ENST00000465630 PIP4P2Q8N4L2 257 aa12.96□□□□□ -0.33
UBR3-207ENST00000465630 ZNF692Q9BU19 519 aaPredicted RBP12.93□□□□□ -0.34
UBR3-207ENST00000465630 SSUH2Q9Y2M2 353 aa12.93□□□□□ -0.34
UBR3-207ENST00000465630 FXR2P51116 673 aaKnown RBP eCLIP12.89□□□□□ -0.35
UBR3-207ENST00000465630 SPDYE1Q8NFV5 336 aaPredicted RBP12.8□□□□□ -0.36
UBR3-207ENST00000465630 CLEC11AQ9Y240 323 aa12.79□□□□□ -0.36
UBR3-207ENST00000465630 PABPN1Q86U42 306 aaKnown RBP eCLIP12.75□□□□□ -0.37
UBR3-207ENST00000465630 PRKAR2AP13861 404 aaKnown RBP12.68□□□□□ -0.38
UBR3-207ENST00000465630 HAX1O00165 279 aa12.67□□□□□ -0.38
UBR3-207ENST00000465630 SP7Q8TDD2 431 aaPredicted RBP12.67□□□□□ -0.38
UBR3-207ENST00000465630 EVX2Q03828 476 aa12.59□□□□□ -0.39
UBR3-207ENST00000465630 CHADLQ6NUI6 762 aa12.59□□□□□ -0.39
UBR3-207ENST00000465630 PRR29P0C7W0 189 aa12.58□□□□□ -0.4
UBR3-207ENST00000465630 SPDYE4A6NLX3 237 aa12.54□□□□□ -0.4
UBR3-207ENST00000465630 C19orf67A6NJJ6 358 aa12.47□□□□□ -0.41
UBR3-207ENST00000465630 FARP1Q9Y4F1 1045 aaPredicted RBP12.38□□□□□ -0.43
UBR3-207ENST00000465630 STAG3Q9UJ98 1225 aa12.37□□□□□ -0.43
UBR3-207ENST00000465630 CREBZFQ9NS37 354 aa12.34□□□□□ -0.43
UBR3-207ENST00000465630 CD44P16070 742 aaKnown RBP12.28□□□□□ -0.44
UBR3-207ENST00000465630 PROM2Q8N271 834 aa12.28□□□□□ -0.44
UBR3-207ENST00000465630 GABBR2O75899 941 aa12.27□□□□□ -0.45
UBR3-207ENST00000465630 MNX1P50219 401 aaPredicted RBP12.16□□□□□ -0.46
UBR3-207ENST00000465630 ZRANB1Q9UGI0 708 aa12.12□□□□□ -0.47
UBR3-207ENST00000465630 ZNF579Q8NAF0 562 aaKnown RBP12.09□□□□□ -0.47
UBR3-207ENST00000465630 POTEIP0CG38 1075 aa12.05□□□□□ -0.48
UBR3-207ENST00000465630 NPM1P06748 294 aaKnown RBP eCLIP12.04□□□□□ -0.48
UBR3-207ENST00000465630 FKBP8Q14318 412 aa12.03□□□□□ -0.48
UBR3-207ENST00000465630 PHF12Q96QT6 1004 aa12□□□□□ -0.49
UBR3-207ENST00000465630 CLCN6P51797 869 aa11.99□□□□□ -0.49
UBR3-207ENST00000465630 PAK3O75914 559 aaPredicted RBP11.98□□□□□ -0.49
UBR3-207ENST00000465630 GALR2O43603 387 aaPredicted RBP11.97□□□□□ -0.49
UBR3-207ENST00000465630 MIER1Q8N108 512 aa11.94□□□□□ -0.5
UBR3-207ENST00000465630 DCBLD2Q96PD2 775 aa11.91□□□□□ -0.5
UBR3-207ENST00000465630 LHX8Q68G74 356 aa11.88□□□□□ -0.51
UBR3-207ENST00000465630 TSPYL2Q9H2G4 693 aaPredicted RBP11.88□□□□□ -0.51
UBR3-207ENST00000465630 PLCD3Q8N3E9 789 aa11.86□□□□□ -0.51
UBR3-207ENST00000465630 PLEKHG5O94827 1062 aa11.85□□□□□ -0.51
UBR3-207ENST00000465630 CCDC61Q9Y6R9 512 aa11.84□□□□□ -0.51
UBR3-207ENST00000465630 RASEFQ8IZ41 740 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 190.8 ms