RNA–Protein interactions for RNA: ENST00000466259.1

ZC3H8-204, Transcript of zinc finger CCCH-type containing 8, humanhuman

TSL 2

Gene ZC3H8, Length 565 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H8-204ENST00000466259 AEBP2Q6ZN18 517 aaPredicted RBP23.07■■□□□ 1.28
ZC3H8-204ENST00000466259 CHIC1Q5VXU3 224 aa21.82■■□□□ 1.08
ZC3H8-204ENST00000466259 SENP3Q9H4L4 574 aaPredicted RBP19.82■□□□□ 0.76
ZC3H8-204ENST00000466259 PHF23Q9BUL5 403 aaPredicted RBP19.49■□□□□ 0.71
ZC3H8-204ENST00000466259 FOXD1Q16676 465 aa18.48■□□□□ 0.55
ZC3H8-204ENST00000466259 POTEDQ86YR6 584 aa17.72■□□□□ 0.43
ZC3H8-204ENST00000466259 MSH5O43196 834 aa17.49■□□□□ 0.39
ZC3H8-204ENST00000466259 PLPPR3Q6T4P5 718 aa17.48■□□□□ 0.39
ZC3H8-204ENST00000466259 PIAS4Q8N2W9 510 aaPredicted RBP17.23■□□□□ 0.35
ZC3H8-204ENST00000466259 PPP6R1Q9UPN7 881 aa17.02■□□□□ 0.32
ZC3H8-204ENST00000466259 ADRA2BP18089 450 aa17■□□□□ 0.31
ZC3H8-204ENST00000466259 SCAF1Q9H7N4 1312 aaKnown RBP15.68■□□□□ 0.1
ZC3H8-204ENST00000466259 MAPK8IP2Q13387 824 aaPredicted RBP15.65■□□□□ 0.1
ZC3H8-204ENST00000466259 DMRT2Q9Y5R5 561 aa15.62■□□□□ 0.09
ZC3H8-204ENST00000466259 CACNB1Q02641 598 aaPredicted RBP15.29■□□□□ 0.04
ZC3H8-204ENST00000466259 PPP4R3CPQ6ZMV5 832 aa15.28■□□□□ 0.04
ZC3H8-204ENST00000466259 DCAF8L1A6NGE4 600 aa15.12■□□□□ 0.01
ZC3H8-204ENST00000466259 CNKSR2Q8WXI2 1034 aa15.02■□□□□ -0
ZC3H8-204ENST00000466259 HOXD11P31277 338 aaPredicted RBP14.97□□□□□ -0.01
ZC3H8-204ENST00000466259 RNF216Q9NWF9 866 aaPredicted RBP14.89□□□□□ -0.03
ZC3H8-204ENST00000466259 RNF39Q9H2S5 420 aa14.85□□□□□ -0.03
ZC3H8-204ENST00000466259 NCBP3Q53F19 620 aaKnown RBP14.77□□□□□ -0.05
ZC3H8-204ENST00000466259 C1QBPQ07021 282 aaKnown RBP14.64□□□□□ -0.07
ZC3H8-204ENST00000466259 DNAJC5BQ9UF47 199 aa14.51□□□□□ -0.09
ZC3H8-204ENST00000466259 NPM3O75607 178 aaKnown RBP14.46□□□□□ -0.09
ZC3H8-204ENST00000466259 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.33□□□□□ -0.125e-7■□□□□ 9.5
ZC3H8-204ENST00000466259 KCNA4P22459 653 aa14.16□□□□□ -0.14
ZC3H8-204ENST00000466259 U3KPZ7 1027 aaPredicted RBP13.96□□□□□ -0.17
ZC3H8-204ENST00000466259 CAPN15O75808 1086 aa13.84□□□□□ -0.19
ZC3H8-204ENST00000466259 POTEHQ6S545 545 aa13.83□□□□□ -0.2
ZC3H8-204ENST00000466259 SLC4A2P04920 1241 aa13.78□□□□□ -0.2
ZC3H8-204ENST00000466259 DSG3P32926 999 aa13.78□□□□□ -0.2
ZC3H8-204ENST00000466259 SPINK5Q9NQ38 1064 aaPredicted RBP13.78□□□□□ -0.2
ZC3H8-204ENST00000466259 APLP2Q06481 763 aa13.71□□□□□ -0.21
ZC3H8-204ENST00000466259 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.68□□□□□ -0.22
ZC3H8-204ENST00000466259 HNRNPUL2Q1KMD3 747 aaKnown RBP13.68□□□□□ -0.22
ZC3H8-204ENST00000466259 SAMD1Q6SPF0 538 aaPredicted RBP13.58□□□□□ -0.24
ZC3H8-204ENST00000466259 ZNF219Q9P2Y4 722 aaPredicted RBP13.58□□□□□ -0.24
ZC3H8-204ENST00000466259 TRHP20396 242 aaPredicted RBP13.56□□□□□ -0.24
ZC3H8-204ENST00000466259 ABCB7O75027 752 aa13.47□□□□□ -0.25
ZC3H8-204ENST00000466259 MYCNP04198 464 aaPredicted RBP13.44□□□□□ -0.26
ZC3H8-204ENST00000466259 SLC4A1APQ9BWU0 796 aaKnown RBP13.41□□□□□ -0.26
ZC3H8-204ENST00000466259 FOXD4L1Q9NU39 408 aa13.27□□□□□ -0.29
ZC3H8-204ENST00000466259 RBM42Q9BTD8 480 aaKnown RBP13.22□□□□□ -0.29
ZC3H8-204ENST00000466259 POLA2Q14181 598 aa13.17□□□□□ -0.3
ZC3H8-204ENST00000466259 CHRDL2Q6WN34 429 aa13.06□□□□□ -0.32
ZC3H8-204ENST00000466259 ATF5Q9Y2D1 282 aaPredicted RBP13.02□□□□□ -0.33
ZC3H8-204ENST00000466259 ZBTB12Q9Y330 459 aaPredicted RBP13□□□□□ -0.33
ZC3H8-204ENST00000466259 ZBTB22O15209 634 aa12.98□□□□□ -0.33
ZC3H8-204ENST00000466259 ATXN8OSP0DMR3 200 aa12.88□□□□□ -0.35
ZC3H8-204ENST00000466259 AKT1S1Q96B36 256 aa12.8□□□□□ -0.36
ZC3H8-204ENST00000466259 SP7Q8TDD2 431 aaPredicted RBP12.78□□□□□ -0.36
ZC3H8-204ENST00000466259 OSCARQ8IYS5 282 aa12.76□□□□□ -0.37
ZC3H8-204ENST00000466259 REM2Q8IYK8 340 aaPredicted RBP12.67□□□□□ -0.38
ZC3H8-204ENST00000466259 FBLN2P98095 1184 aa12.66□□□□□ -0.38
ZC3H8-204ENST00000466259 PIP4P2Q8N4L2 257 aa12.65□□□□□ -0.38
ZC3H8-204ENST00000466259 HAX1O00165 279 aa12.59□□□□□ -0.39
ZC3H8-204ENST00000466259 SPDYE2BA6NHP3 402 aa12.55□□□□□ -0.4
ZC3H8-204ENST00000466259 SPDYE6P0CI01 402 aa12.55□□□□□ -0.4
ZC3H8-204ENST00000466259 SPDYE2Q495Y8 402 aa12.55□□□□□ -0.4
ZC3H8-204ENST00000466259 PITPNM1O00562 1244 aa12.54□□□□□ -0.4
ZC3H8-204ENST00000466259 FXR2P51116 673 aaKnown RBP eCLIP12.49□□□□□ -0.41
ZC3H8-204ENST00000466259 MKRN4PQ13434 485 aaPredicted RBP12.44□□□□□ -0.42
ZC3H8-204ENST00000466259 CSRNP3Q8WYN3 585 aa12.38□□□□□ -0.43
ZC3H8-204ENST00000466259 ZNF692Q9BU19 519 aaPredicted RBP12.38□□□□□ -0.43
ZC3H8-204ENST00000466259 SPDYE1Q8NFV5 336 aaPredicted RBP12.35□□□□□ -0.43
ZC3H8-204ENST00000466259 SSUH2Q9Y2M2 353 aa12.34□□□□□ -0.43
ZC3H8-204ENST00000466259 EVX2Q03828 476 aa12.31□□□□□ -0.44
ZC3H8-204ENST00000466259 CLEC11AQ9Y240 323 aa12.31□□□□□ -0.44
ZC3H8-204ENST00000466259 EHMT2Q96KQ7 1210 aa12.27□□□□□ -0.45
ZC3H8-204ENST00000466259 PRKAR2AP13861 404 aaKnown RBP12.24□□□□□ -0.45
ZC3H8-204ENST00000466259 PABPN1Q86U42 306 aaKnown RBP eCLIP12.19□□□□□ -0.46
ZC3H8-204ENST00000466259 C19orf67A6NJJ6 358 aa12.11□□□□□ -0.47
ZC3H8-204ENST00000466259 PRR29P0C7W0 189 aa12.11□□□□□ -0.47
ZC3H8-204ENST00000466259 GABBR2O75899 941 aa12.05□□□□□ -0.48
ZC3H8-204ENST00000466259 CHADLQ6NUI6 762 aa12.02□□□□□ -0.49
ZC3H8-204ENST00000466259 LHX8Q68G74 356 aa12□□□□□ -0.49
ZC3H8-204ENST00000466259 SPDYE4A6NLX3 237 aa11.91□□□□□ -0.5
ZC3H8-204ENST00000466259 STAG3Q9UJ98 1225 aa11.91□□□□□ -0.5
ZC3H8-204ENST00000466259 FARP1Q9Y4F1 1045 aaPredicted RBP11.87□□□□□ -0.51
ZC3H8-204ENST00000466259 CD44P16070 742 aaKnown RBP11.83□□□□□ -0.52
ZC3H8-204ENST00000466259 CREBZFQ9NS37 354 aa11.75□□□□□ -0.53
ZC3H8-204ENST00000466259 POTEIP0CG38 1075 aa11.74□□□□□ -0.53
ZC3H8-204ENST00000466259 CLCN6P51797 869 aa11.74□□□□□ -0.53
ZC3H8-204ENST00000466259 DCBLD2Q96PD2 775 aa11.71□□□□□ -0.53
ZC3H8-204ENST00000466259 ZRANB1Q9UGI0 708 aa11.65□□□□□ -0.54
ZC3H8-204ENST00000466259 ZNF579Q8NAF0 562 aaKnown RBP11.64□□□□□ -0.55
ZC3H8-204ENST00000466259 PAK3O75914 559 aaPredicted RBP11.63□□□□□ -0.55
ZC3H8-204ENST00000466259 NPM1P06748 294 aaKnown RBP eCLIP11.62□□□□□ -0.55
ZC3H8-204ENST00000466259 PLSCR2Q9NRY7 297 aa11.62□□□□□ -0.55
ZC3H8-204ENST00000466259 PROM2Q8N271 834 aa11.57□□□□□ -0.56
ZC3H8-204ENST00000466259 MNX1P50219 401 aaPredicted RBP11.52□□□□□ -0.57
ZC3H8-204ENST00000466259 GALR2O43603 387 aaPredicted RBP11.49□□□□□ -0.57
ZC3H8-204ENST00000466259 PLEKHG5O94827 1062 aa11.47□□□□□ -0.57
ZC3H8-204ENST00000466259 PHF12Q96QT6 1004 aa11.46□□□□□ -0.57
ZC3H8-204ENST00000466259 OTUD5Q96G74 571 aa11.41□□□□□ -0.58
ZC3H8-204ENST00000466259 MIER1Q8N108 512 aa11.38□□□□□ -0.59
ZC3H8-204ENST00000466259 POTEB2H3BUK9 544 aa11.36□□□□□ -0.59
ZC3H8-204ENST00000466259 TSPYL2Q9H2G4 693 aaPredicted RBP11.36□□□□□ -0.59
ZC3H8-204ENST00000466259 POTEMA6NI47 508 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms