Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 AL008721.1-201ENST00000609964 604 ntBASIC12.03□□□□□ -0.48
APOC1P02654 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
APOC1P02654 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
APOC1P02654 OSTM1-AS1-202ENST00000441184 3334 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
APOC1P02654 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
APOC1P02654 IYD-208ENST00000500320 2158 ntTSL 2 BASIC12.03□□□□□ -0.48
APOC1P02654 KNDC1-202ENST00000368571 3925 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
APOC1P02654 ALDH18A1-202ENST00000371224 3359 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
APOC1P02654 OR8J1-202ENST00000533152 1320 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
APOC1P02654 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
APOC1P02654 GHET1-201ENST00000627071 1906 ntBASIC12.03□□□□□ -0.48
APOC1P02654 ZBTB20-211ENST00000471418 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
APOC1P02654 OFD1-203ENST00000380567 3736 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
APOC1P02654 MED24-204ENST00000394128 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
APOC1P02654 LINC01019-201ENST00000505443 3199 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
APOC1P02654 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC12.03□□□□□ -0.48
APOC1P02654 IL9RP3-201ENST00000442856 1674 ntBASIC12.03□□□□□ -0.48
APOC1P02654 PHF10-206ENST00000621772 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
APOC1P02654 VENTX-201ENST00000325980 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
APOC1P02654 PCDHB19P-202ENST00000625133 2914 ntBASIC12.03□□□□□ -0.48
APOC1P02654 VAMP7-202ENST00000286448 2646 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
APOC1P02654 FBLN2-207ENST00000492059 4193 ntAPPRIS P4 TSL 2 BASIC12.03□□□□□ -0.48
APOC1P02654 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
APOC1P02654 SGSM3-201ENST00000248929 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
APOC1P02654 SPCS3-201ENST00000503362 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
APOC1P02654 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
APOC1P02654 PPIL2-201ENST00000335025 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
APOC1P02654 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC12.02□□□□□ -0.48
APOC1P02654 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
APOC1P02654 POMT1-203ENST00000372228 3123 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
APOC1P02654 OTOF-203ENST00000339598 4756 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
APOC1P02654 NXPE3-205ENST00000491511 8074 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
APOC1P02654 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
APOC1P02654 SNRNP27-201ENST00000244227 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
APOC1P02654 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.48
APOC1P02654 OPA3-201ENST00000263275 7828 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
APOC1P02654 ZNF646-201ENST00000300850 6892 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
APOC1P02654 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
APOC1P02654 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
APOC1P02654 PDXK-201ENST00000291565 7366 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
APOC1P02654 MYRIP-201ENST00000302541 5077 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
APOC1P02654 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
APOC1P02654 KIR2DL3-201ENST00000342376 1590 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
APOC1P02654 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
APOC1P02654 SLC6A1-201ENST00000287766 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
APOC1P02654 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
APOC1P02654 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
APOC1P02654 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC12.02□□□□□ -0.49
APOC1P02654 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC12.02□□□□□ -0.49
APOC1P02654 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC12.02□□□□□ -0.49
APOC1P02654 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
APOC1P02654 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC12.02□□□□□ -0.49
APOC1P02654 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
APOC1P02654 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC12.02□□□□□ -0.49
APOC1P02654 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC12.02□□□□□ -0.49
APOC1P02654 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
APOC1P02654 Z97180.1-201ENST00000445173 988 ntBASIC12.02□□□□□ -0.49
APOC1P02654 BX284668.4-201ENST00000453917 508 ntBASIC12.02□□□□□ -0.49
APOC1P02654 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
APOC1P02654 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC12.02□□□□□ -0.49
APOC1P02654 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC12.02□□□□□ -0.49
APOC1P02654 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC12.02□□□□□ -0.49
APOC1P02654 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC12.02□□□□□ -0.49
APOC1P02654 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
APOC1P02654 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC12.02□□□□□ -0.49
APOC1P02654 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
APOC1P02654 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC12.02□□□□□ -0.49
APOC1P02654 AL049840.2-201ENST00000602722 535 ntBASIC12.02□□□□□ -0.49
APOC1P02654 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC12.02□□□□□ -0.49
APOC1P02654 SIRPA-204ENST00000622179 4570 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.49
APOC1P02654 SNIP1-201ENST00000296215 4605 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
APOC1P02654 TMEM134-201ENST00000308022 3534 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
APOC1P02654 XBP1-204ENST00000405219 1690 ntTSL 2 BASIC12.02□□□□□ -0.49
APOC1P02654 SETMAR-205ENST00000425863 1657 ntTSL 2 BASIC12.02□□□□□ -0.49
APOC1P02654 REXO5-208ENST00000564274 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
APOC1P02654 AL513497.1-201ENST00000624273 2083 ntBASIC12.02□□□□□ -0.49
APOC1P02654 ATL2-204ENST00000406122 2864 ntTSL 5 BASIC12.02□□□□□ -0.49
APOC1P02654 SLC2A14-205ENST00000535295 1732 ntTSL 2 BASIC12.02□□□□□ -0.49
APOC1P02654 LAMB3-201ENST00000356082 4055 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
APOC1P02654 WBP1L-202ENST00000448841 4085 ntAPPRIS ALT1 TSL 2 BASIC12.02□□□□□ -0.49
APOC1P02654 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
APOC1P02654 FAM90A2P-201ENST00000511144 1395 ntBASIC12.02□□□□□ -0.49
APOC1P02654 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
APOC1P02654 FAM90A25P-201ENST00000528404 1395 ntBASIC12.02□□□□□ -0.49
APOC1P02654 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC12.02□□□□□ -0.49
APOC1P02654 PLEKHM1P1-205ENST00000582986 5014 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
APOC1P02654 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
APOC1P02654 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
APOC1P02654 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
APOC1P02654 CAPN13-201ENST00000295055 2683 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
APOC1P02654 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
APOC1P02654 C3orf20-202ENST00000412910 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
APOC1P02654 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
APOC1P02654 THPO-203ENST00000445696 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
APOC1P02654 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
APOC1P02654 ESR2-213ENST00000557772 5458 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
APOC1P02654 ADD1-207ENST00000446856 3745 ntTSL 5 BASIC12.01□□□□□ -0.49
APOC1P02654 CBL-201ENST00000264033 11231 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
APOC1P02654 PAM-203ENST00000346918 3302 ntTSL 5 BASIC12.01□□□□□ -0.49
APOC1P02654 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms