Protein–RNA interactions for Protein: Q9UNL2

SSR3, Translocon-associated protein subunit gamma, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3Q9UNL2 AC093512.1-201ENST00000617969 520 ntBASIC12.06□□□□□ -0.48
SSR3Q9UNL2 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SSR3Q9UNL2 AC092299.1-201ENST00000632679 757 ntBASIC12.06□□□□□ -0.48
SSR3Q9UNL2 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SSR3Q9UNL2 SEMA6D-206ENST00000389428 5874 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SSR3Q9UNL2 FAN1-201ENST00000362065 4891 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SSR3Q9UNL2 AL391845.2-201ENST00000443930 1954 ntTSL 2 BASIC12.06□□□□□ -0.48
SSR3Q9UNL2 AL357140.3-201ENST00000639753 1983 ntBASIC12.06□□□□□ -0.48
SSR3Q9UNL2 TRIM37-202ENST00000393065 3548 ntTSL 2 BASIC12.06□□□□□ -0.48
SSR3Q9UNL2 HMGB1-202ENST00000339872 2319 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
SSR3Q9UNL2 PAK1-215ENST00000530617 3001 ntTSL 2 BASIC12.06□□□□□ -0.48
SSR3Q9UNL2 LIG1-201ENST00000263274 3384 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
SSR3Q9UNL2 TP53I11-203ENST00000395648 3381 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
SSR3Q9UNL2 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
SSR3Q9UNL2 DLGAP2-AS1-201ENST00000518009 1810 ntTSL 2 BASIC12.06□□□□□ -0.48
SSR3Q9UNL2 SLC17A9-202ENST00000370351 3580 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
SSR3Q9UNL2 EPB42-202ENST00000441366 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SSR3Q9UNL2 HOXA1-202ENST00000355633 2016 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SSR3Q9UNL2 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SSR3Q9UNL2 DDC-212ENST00000615193 1674 ntTSL 3 BASIC12.06□□□□□ -0.48
SSR3Q9UNL2 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SSR3Q9UNL2 ACTN2-201ENST00000366578 4863 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
SSR3Q9UNL2 CYP4F11-205ENST00000620614 2908 ntTSL 5 BASIC12.06□□□□□ -0.48
SSR3Q9UNL2 C12orf74-201ENST00000397833 1856 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
SSR3Q9UNL2 DCAF6-203ENST00000367843 3302 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
SSR3Q9UNL2 CALM1-201ENST00000356978 4242 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
SSR3Q9UNL2 LILRB3-203ENST00000391750 2848 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
SSR3Q9UNL2 PTPRG-201ENST00000295874 4650 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
SSR3Q9UNL2 CTPS1-202ENST00000372621 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SSR3Q9UNL2 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SSR3Q9UNL2 KCNA4-201ENST00000328224 4172 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SSR3Q9UNL2 MPPE1-202ENST00000317235 2324 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SSR3Q9UNL2 ACADL-201ENST00000233710 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SSR3Q9UNL2 PPP4R1-202ENST00000400555 3885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
SSR3Q9UNL2 CRHR1-206ENST00000398285 2399 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SSR3Q9UNL2 FOSB-203ENST00000443841 3346 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SSR3Q9UNL2 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SSR3Q9UNL2 SLC28A1-203ENST00000394573 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SSR3Q9UNL2 IWS1-201ENST00000295321 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SSR3Q9UNL2 TRAF5-203ENST00000367004 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SSR3Q9UNL2 WASF2-202ENST00000618852 5676 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SSR3Q9UNL2 LRRC8E-201ENST00000306708 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SSR3Q9UNL2 CPSF6-201ENST00000266679 2229 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SSR3Q9UNL2 ERCC2-204ENST00000391945 4153 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SSR3Q9UNL2 SMCR5-201ENST00000543475 2844 ntBASIC12.05□□□□□ -0.48
SSR3Q9UNL2 POLR1B-216ENST00000537335 4961 ntTSL 2 BASIC12.05□□□□□ -0.48
SSR3Q9UNL2 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SSR3Q9UNL2 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SSR3Q9UNL2 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SSR3Q9UNL2 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC12.05□□□□□ -0.48
SSR3Q9UNL2 MIR1202-201ENST00000408529 83 ntBASIC12.05□□□□□ -0.48
SSR3Q9UNL2 SERF2-206ENST00000409291 807 ntTSL 3 BASIC12.05□□□□□ -0.48
SSR3Q9UNL2 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC12.05□□□□□ -0.48
SSR3Q9UNL2 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC12.05□□□□□ -0.48
SSR3Q9UNL2 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC12.05□□□□□ -0.48
SSR3Q9UNL2 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC12.05□□□□□ -0.48
SSR3Q9UNL2 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SSR3Q9UNL2 AC005722.1-201ENST00000431878 964 ntBASIC12.05□□□□□ -0.48
SSR3Q9UNL2 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC12.05□□□□□ -0.48
SSR3Q9UNL2 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
SSR3Q9UNL2 AL137779.3-201ENST00000553295 729 ntBASIC12.05□□□□□ -0.48
SSR3Q9UNL2 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC12.05□□□□□ -0.48
SSR3Q9UNL2 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SSR3Q9UNL2 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SSR3Q9UNL2 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
SSR3Q9UNL2 DDX5-235ENST00000630471 473 ntTSL 4 BASIC12.05□□□□□ -0.48
SSR3Q9UNL2 AC023355.1-202ENST00000612262 4242 ntTSL 5 BASIC12.05□□□□□ -0.48
SSR3Q9UNL2 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SSR3Q9UNL2 OLAH-203ENST00000378228 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SSR3Q9UNL2 PECR-201ENST00000265322 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SSR3Q9UNL2 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC12.05□□□□□ -0.48
SSR3Q9UNL2 AC009093.1-201ENST00000566070 2099 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SSR3Q9UNL2 AAGAB-207ENST00000561452 2251 ntTSL 5 BASIC12.05□□□□□ -0.48
SSR3Q9UNL2 HEY2-202ENST00000368365 2461 ntTSL 2 BASIC12.05□□□□□ -0.48
SSR3Q9UNL2 GREB1-201ENST00000234142 8444 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SSR3Q9UNL2 POFUT2-203ENST00000349485 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SSR3Q9UNL2 TTC16-201ENST00000373289 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SSR3Q9UNL2 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SSR3Q9UNL2 IGHG2-202ENST00000641095 2594 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
SSR3Q9UNL2 DGKH-203ENST00000379274 4202 ntTSL 2 BASIC12.05□□□□□ -0.48
SSR3Q9UNL2 RHBDL3-201ENST00000269051 4661 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
SSR3Q9UNL2 SLC7A9-201ENST00000023064 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SSR3Q9UNL2 RPL23A-204ENST00000422514 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SSR3Q9UNL2 LINC00540-203ENST00000631321 2412 ntTSL 2 BASIC12.05□□□□□ -0.48
SSR3Q9UNL2 SOX30-201ENST00000265007 3265 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
SSR3Q9UNL2 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SSR3Q9UNL2 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SSR3Q9UNL2 ERBB2-219ENST00000584601 4792 ntTSL 2 BASIC12.05□□□□□ -0.48
SSR3Q9UNL2 NPNT-202ENST00000379987 4598 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
SSR3Q9UNL2 ZWILCH-209ENST00000565627 1845 ntTSL 2 BASIC12.04□□□□□ -0.48
SSR3Q9UNL2 NECTIN2-201ENST00000252483 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SSR3Q9UNL2 SEC14L1-202ENST00000430767 5283 ntAPPRIS P3 TSL 2 BASIC12.04□□□□□ -0.48
SSR3Q9UNL2 DDR1-226ENST00000376569 3783 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
SSR3Q9UNL2 COL8A1-201ENST00000261037 5705 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SSR3Q9UNL2 TNRC6C-201ENST00000301624 9632 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
SSR3Q9UNL2 SRSF5-201ENST00000394366 1638 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SSR3Q9UNL2 ENO2-209ENST00000538763 1646 ntTSL 5 BASIC12.04□□□□□ -0.48
SSR3Q9UNL2 NLRP2-214ENST00000543010 3576 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
SSR3Q9UNL2 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SSR3Q9UNL2 YTHDF2-208ENST00000541996 2719 ntTSL 2 BASIC12.04□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms