Protein–RNA interactions for Protein: P35716

SOX11, Transcription factor SOX-11, humanhuman

Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX11P35716 SCNN1B-202ENST00000343070 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SOX11P35716 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC13.37□□□□□ -0.27
SOX11P35716 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SOX11P35716 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
SOX11P35716 SPTB-203ENST00000389721 6705 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SOX11P35716 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SOX11P35716 LIN28A-202ENST00000326279 4008 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SOX11P35716 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SOX11P35716 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC13.37□□□□□ -0.27
SOX11P35716 WDR6-201ENST00000395474 4401 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SOX11P35716 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SOX11P35716 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SOX11P35716 PITPNM3-202ENST00000421306 6945 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
SOX11P35716 MAPK10-262ENST00000641051 5738 ntBASIC13.36□□□□□ -0.27
SOX11P35716 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
SOX11P35716 ZNF564-201ENST00000339282 2935 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SOX11P35716 TP73-203ENST00000357733 4899 ntTSL 5 BASIC13.36□□□□□ -0.27
SOX11P35716 NKAP-201ENST00000371410 5963 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SOX11P35716 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC13.36□□□□□ -0.27
SOX11P35716 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC13.36□□□□□ -0.27
SOX11P35716 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC13.36□□□□□ -0.27
SOX11P35716 MSNP1-201ENST00000511640 1732 ntBASIC13.36□□□□□ -0.27
SOX11P35716 FAM76A-204ENST00000373954 3567 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SOX11P35716 KCNJ5-202ENST00000529694 5940 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SOX11P35716 CAMTA2-204ENST00000414043 4589 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SOX11P35716 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SOX11P35716 SEC24B-201ENST00000265175 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SOX11P35716 LAIR1-204ENST00000391743 2735 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
SOX11P35716 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SOX11P35716 RAB6A-201ENST00000310653 3389 ntAPPRIS P5 TSL 1 (best) BASIC13.36□□□□□ -0.27
SOX11P35716 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SOX11P35716 BTN3A2-202ENST00000377708 1634 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
SOX11P35716 ZBED8-201ENST00000408953 2851 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
SOX11P35716 TMEM30A-203ENST00000475111 2791 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SOX11P35716 PDZRN3-208ENST00000479530 2778 ntTSL 2 BASIC13.36□□□□□ -0.27
SOX11P35716 PTPRN2-202ENST00000389416 4692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SOX11P35716 MANEA-AS1-201ENST00000564541 2268 ntBASIC13.36□□□□□ -0.27
SOX11P35716 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SOX11P35716 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SOX11P35716 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
SOX11P35716 IL12RB1-207ENST00000600835 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SOX11P35716 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SOX11P35716 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SOX11P35716 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SOX11P35716 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SOX11P35716 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SOX11P35716 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SOX11P35716 BANF1P3-201ENST00000412556 261 ntBASIC13.36□□□□□ -0.27
SOX11P35716 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SOX11P35716 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC13.36□□□□□ -0.27
SOX11P35716 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC13.36□□□□□ -0.27
SOX11P35716 NOC2LP1-201ENST00000450578 752 ntBASIC13.36□□□□□ -0.27
SOX11P35716 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC13.36□□□□□ -0.27
SOX11P35716 RHEB-207ENST00000496004 744 ntTSL 2 BASIC13.36□□□□□ -0.27
SOX11P35716 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SOX11P35716 LINC02424-201ENST00000548512 1264 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SOX11P35716 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC13.36□□□□□ -0.27
SOX11P35716 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC13.36□□□□□ -0.27
SOX11P35716 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
SOX11P35716 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC13.36□□□□□ -0.27
SOX11P35716 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
SOX11P35716 SNX1-214ENST00000625244 324 ntTSL 5 BASIC13.36□□□□□ -0.27
SOX11P35716 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SOX11P35716 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SOX11P35716 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC13.36□□□□□ -0.27
SOX11P35716 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
SOX11P35716 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
SOX11P35716 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC13.36□□□□□ -0.27
SOX11P35716 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SOX11P35716 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SOX11P35716 ARID4A-206ENST00000431317 5783 ntTSL 5 BASIC13.36□□□□□ -0.27
SOX11P35716 CUL4A-204ENST00000451881 3724 ntTSL 5 BASIC13.36□□□□□ -0.27
SOX11P35716 SLX4-201ENST00000294008 7307 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
SOX11P35716 TBC1D22B-201ENST00000373491 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SOX11P35716 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SOX11P35716 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC13.36□□□□□ -0.27
SOX11P35716 AC092028.1-202ENST00000641483 3547 ntBASIC13.35□□□□□ -0.27
SOX11P35716 AC092028.1-201ENST00000641781 3540 ntBASIC13.35□□□□□ -0.27
SOX11P35716 LDLRAD4-AS1-201ENST00000588672 2190 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SOX11P35716 VMP1-201ENST00000262291 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SOX11P35716 INIP-203ENST00000374242 4233 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SOX11P35716 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SOX11P35716 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SOX11P35716 ZBED2-201ENST00000317012 2311 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
SOX11P35716 SPACA6P-AS-201ENST00000602324 3962 ntTSL 2 BASIC13.35□□□□□ -0.27
SOX11P35716 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SOX11P35716 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC13.35□□□□□ -0.27
SOX11P35716 ADAMTSL4-202ENST00000369038 4167 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
SOX11P35716 NHSL1-204ENST00000427025 7500 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
SOX11P35716 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SOX11P35716 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC13.35□□□□□ -0.27
SOX11P35716 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SOX11P35716 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SOX11P35716 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
SOX11P35716 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
SOX11P35716 MIR557-201ENST00000385239 98 ntBASIC13.35□□□□□ -0.27
SOX11P35716 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC13.35□□□□□ -0.27
SOX11P35716 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SOX11P35716 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC13.35□□□□□ -0.27
SOX11P35716 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms