Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 RPUSD4-208ENST00000533628 2053 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RC3H1Q5TC82 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RC3H1Q5TC82 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RC3H1Q5TC82 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RC3H1Q5TC82 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RC3H1Q5TC82 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RC3H1Q5TC82 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC16.55■□□□□ 0.24
RC3H1Q5TC82 YAP1P1-201ENST00000401504 1393 ntBASIC16.55■□□□□ 0.24
RC3H1Q5TC82 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RC3H1Q5TC82 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RC3H1Q5TC82 PMP22-203ENST00000395938 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RC3H1Q5TC82 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RC3H1Q5TC82 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RC3H1Q5TC82 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RC3H1Q5TC82 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RC3H1Q5TC82 MBL3P-201ENST00000402234 644 ntBASIC16.55■□□□□ 0.24
RC3H1Q5TC82 AC007881.1-201ENST00000437460 187 ntBASIC16.55■□□□□ 0.24
RC3H1Q5TC82 CHCHD2P6-201ENST00000454346 447 ntBASIC16.55■□□□□ 0.24
RC3H1Q5TC82 RN7SL483P-201ENST00000478417 285 ntBASIC16.55■□□□□ 0.24
RC3H1Q5TC82 AC017007.3-201ENST00000479865 435 ntBASIC16.55■□□□□ 0.24
RC3H1Q5TC82 WISP1-205ENST00000519433 545 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RC3H1Q5TC82 EXTL3-AS1-204ENST00000523789 543 ntTSL 2 BASIC16.55■□□□□ 0.24
RC3H1Q5TC82 AC089987.3-201ENST00000551847 588 ntTSL 4 BASIC16.55■□□□□ 0.24
RC3H1Q5TC82 DEGS2-202ENST00000553834 421 ntTSL 3 BASIC16.55■□□□□ 0.24
RC3H1Q5TC82 AP003096.1-201ENST00000565199 503 ntTSL 3 BASIC16.55■□□□□ 0.24
RC3H1Q5TC82 DERL2-206ENST00000572834 589 ntTSL 3 BASIC16.55■□□□□ 0.24
RC3H1Q5TC82 AC093495.1-215ENST00000626655 821 ntTSL 5 BASIC16.55■□□□□ 0.24
RC3H1Q5TC82 AL592295.4-201ENST00000636161 997 ntTSL 4 BASIC16.55■□□□□ 0.24
RC3H1Q5TC82 BIN3-212ENST00000640731 450 ntTSL 5 BASIC16.55■□□□□ 0.24
RC3H1Q5TC82 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RC3H1Q5TC82 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.55■□□□□ 0.24
RC3H1Q5TC82 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
RC3H1Q5TC82 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RC3H1Q5TC82 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC16.55■□□□□ 0.24
RC3H1Q5TC82 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
RC3H1Q5TC82 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RC3H1Q5TC82 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RC3H1Q5TC82 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RC3H1Q5TC82 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
RC3H1Q5TC82 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC16.55■□□□□ 0.24
RC3H1Q5TC82 ACVR1C-202ENST00000335450 1501 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RC3H1Q5TC82 PITPNB-201ENST00000320996 2826 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RC3H1Q5TC82 GUCY1B3-207ENST00000513437 2355 ntTSL 2 BASIC16.55■□□□□ 0.24
RC3H1Q5TC82 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC16.55■□□□□ 0.24
RC3H1Q5TC82 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RC3H1Q5TC82 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC16.54■□□□□ 0.24
RC3H1Q5TC82 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC16.54■□□□□ 0.24
RC3H1Q5TC82 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RC3H1Q5TC82 RBM22P2-201ENST00000393978 1814 ntBASIC16.54■□□□□ 0.24
RC3H1Q5TC82 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RC3H1Q5TC82 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
RC3H1Q5TC82 ZNF384-204ENST00000396801 3008 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
RC3H1Q5TC82 RBMS3-210ENST00000456853 1394 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RC3H1Q5TC82 SLC37A3-203ENST00000447932 3254 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RC3H1Q5TC82 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RC3H1Q5TC82 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RC3H1Q5TC82 LINC02381-202ENST00000635070 1341 ntTSL 5 BASIC16.54■□□□□ 0.24
RC3H1Q5TC82 TRAF4-202ENST00000262396 683 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RC3H1Q5TC82 CRYGD-201ENST00000264376 619 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RC3H1Q5TC82 FAM86FP-201ENST00000338711 969 ntBASIC16.54■□□□□ 0.24
RC3H1Q5TC82 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RC3H1Q5TC82 CD33-202ENST00000391796 1089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RC3H1Q5TC82 AL391647.1-201ENST00000395664 511 ntBASIC16.54■□□□□ 0.24
RC3H1Q5TC82 HNRNPA1P59-201ENST00000430583 918 ntBASIC16.54■□□□□ 0.24
RC3H1Q5TC82 AC069277.1-201ENST00000433639 1083 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RC3H1Q5TC82 OR2A15P-201ENST00000463814 900 ntBASIC16.54■□□□□ 0.24
RC3H1Q5TC82 LINC01606-208ENST00000521653 557 ntTSL 4 BASIC16.54■□□□□ 0.24
RC3H1Q5TC82 LINC01551-203ENST00000550266 455 ntTSL 3 BASIC16.54■□□□□ 0.24
RC3H1Q5TC82 AC008982.1-201ENST00000594769 963 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
RC3H1Q5TC82 PLA2G4C-AS1-203ENST00000601950 454 ntTSL 3 BASIC16.54■□□□□ 0.24
RC3H1Q5TC82 AC010335.3-201ENST00000623767 531 ntBASIC16.54■□□□□ 0.24
RC3H1Q5TC82 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RC3H1Q5TC82 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
RC3H1Q5TC82 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
RC3H1Q5TC82 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RC3H1Q5TC82 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
RC3H1Q5TC82 CXorf40A-203ENST00000422892 1536 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
RC3H1Q5TC82 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RC3H1Q5TC82 F2-205ENST00000530231 1849 ntTSL 5 BASIC16.54■□□□□ 0.24
RC3H1Q5TC82 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RC3H1Q5TC82 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
RC3H1Q5TC82 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RC3H1Q5TC82 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC16.54■□□□□ 0.24
RC3H1Q5TC82 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RC3H1Q5TC82 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC16.54■□□□□ 0.24
RC3H1Q5TC82 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RC3H1Q5TC82 SERPINB8-209ENST00000636430 1719 ntTSL 5 BASIC16.53■□□□□ 0.24
RC3H1Q5TC82 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RC3H1Q5TC82 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC16.53■□□□□ 0.24
RC3H1Q5TC82 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RC3H1Q5TC82 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RC3H1Q5TC82 AC139749.1-202ENST00000617529 3139 ntBASIC16.53■□□□□ 0.24
RC3H1Q5TC82 STX3-207ENST00000633708 3111 ntTSL 5 BASIC16.53■□□□□ 0.24
RC3H1Q5TC82 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RC3H1Q5TC82 L3MBTL1-202ENST00000373134 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RC3H1Q5TC82 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RC3H1Q5TC82 SLC25A30-207ENST00000539591 3608 ntTSL 2 BASIC16.53■□□□□ 0.24
RC3H1Q5TC82 MT1F-201ENST00000334350 690 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RC3H1Q5TC82 IGHV1OR15-9-201ENST00000338912 353 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
RC3H1Q5TC82 AC244197.2-201ENST00000370438 655 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms