Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
MMP13P45452 SNX12-206ENST00000622259 661 ntTSL 5 BASIC14.08□□□□□ -0.16
MMP13P45452 LNP1-201ENST00000383693 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
MMP13P45452 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
MMP13P45452 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
MMP13P45452 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC14.08□□□□□ -0.16
MMP13P45452 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
MMP13P45452 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
MMP13P45452 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
MMP13P45452 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
MMP13P45452 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
MMP13P45452 SH3KBP1-202ENST00000379698 2678 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
MMP13P45452 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
MMP13P45452 ACER1-201ENST00000301452 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
MMP13P45452 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
MMP13P45452 VMP1-201ENST00000262291 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
MMP13P45452 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
MMP13P45452 MRPL44-201ENST00000258383 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
MMP13P45452 GRM1-202ENST00000355289 3874 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
MMP13P45452 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
MMP13P45452 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
MMP13P45452 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
MMP13P45452 INO80C-202ENST00000334598 974 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
MMP13P45452 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
MMP13P45452 A1CF-204ENST00000373997 2116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
MMP13P45452 UFM1-202ENST00000379649 846 ntTSL 4 BASIC14.07□□□□□ -0.16
MMP13P45452 DKKL1P1-201ENST00000400550 698 ntBASIC14.07□□□□□ -0.16
MMP13P45452 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
MMP13P45452 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC14.07□□□□□ -0.16
MMP13P45452 MAGEA5-201ENST00000446757 942 ntBASIC14.07□□□□□ -0.16
MMP13P45452 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC14.07□□□□□ -0.16
MMP13P45452 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC14.07□□□□□ -0.16
MMP13P45452 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
MMP13P45452 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
MMP13P45452 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC14.07□□□□□ -0.16
MMP13P45452 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC14.07□□□□□ -0.16
MMP13P45452 FOS-204ENST00000554617 796 ntTSL 2 BASIC14.07□□□□□ -0.16
MMP13P45452 PRKXP1-201ENST00000561423 1122 ntBASIC14.07□□□□□ -0.16
MMP13P45452 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC14.07□□□□□ -0.16
MMP13P45452 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC14.07□□□□□ -0.16
MMP13P45452 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC14.07□□□□□ -0.16
MMP13P45452 SNORD3B-1-201ENST00000577988 758 ntBASIC14.07□□□□□ -0.16
MMP13P45452 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
MMP13P45452 AC138894.2-201ENST00000602838 371 ntBASIC14.07□□□□□ -0.16
MMP13P45452 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC14.07□□□□□ -0.16
MMP13P45452 AC087392.5-201ENST00000612517 489 ntBASIC14.07□□□□□ -0.16
MMP13P45452 AC084781.1-201ENST00000613737 656 ntBASIC14.07□□□□□ -0.16
MMP13P45452 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
MMP13P45452 IFT122-204ENST00000349441 3569 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
MMP13P45452 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
MMP13P45452 RHOH-222ENST00000617441 1872 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
MMP13P45452 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
MMP13P45452 KIF9-207ENST00000444589 2791 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
MMP13P45452 EPM2A-207ENST00000611340 2786 ntTSL 2 BASIC14.07□□□□□ -0.16
MMP13P45452 AC074138.1-201ENST00000611182 1303 ntBASIC14.07□□□□□ -0.16
MMP13P45452 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
MMP13P45452 SLC26A8-202ENST00000394602 3144 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
MMP13P45452 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
MMP13P45452 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
MMP13P45452 CSNK1G1-209ENST00000634811 2592 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
MMP13P45452 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
MMP13P45452 MCF2L-213ENST00000421756 3560 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
MMP13P45452 PDE1B-203ENST00000538346 1711 ntTSL 2 BASIC14.07□□□□□ -0.16
MMP13P45452 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
MMP13P45452 DYRK4-214ENST00000543431 2068 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
MMP13P45452 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
MMP13P45452 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
MMP13P45452 NDRG2-201ENST00000298684 1784 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
MMP13P45452 GDA-203ENST00000376986 1771 ntTSL 2 BASIC14.06□□□□□ -0.16
MMP13P45452 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
MMP13P45452 GALNT15-203ENST00000437509 2416 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
MMP13P45452 AP001258.1-201ENST00000501817 2110 ntTSL 5 BASIC14.06□□□□□ -0.16
MMP13P45452 AAR2-203ENST00000397286 1466 ntTSL 5 BASIC14.06□□□□□ -0.16
MMP13P45452 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC14.06□□□□□ -0.16
MMP13P45452 TNK1-201ENST00000570896 3122 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
MMP13P45452 HOXB13-201ENST00000290295 3467 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
MMP13P45452 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC14.06□□□□□ -0.16
MMP13P45452 BHMT-201ENST00000274353 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
MMP13P45452 COPS7B-201ENST00000350033 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
MMP13P45452 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
MMP13P45452 LOXL3-204ENST00000409549 2897 ntTSL 2 BASIC14.06□□□□□ -0.16
MMP13P45452 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
MMP13P45452 KIR2DL3-201ENST00000342376 1590 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
MMP13P45452 ATF6B-209ENST00000375201 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
MMP13P45452 ATF6B-210ENST00000375203 2620 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
MMP13P45452 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
MMP13P45452 COG5-201ENST00000297135 4060 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
MMP13P45452 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
MMP13P45452 KLF4-206ENST00000610832 1956 ntTSL 5 BASIC14.06□□□□□ -0.16
MMP13P45452 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
MMP13P45452 CBR4-202ENST00000504480 1602 ntTSL 2 BASIC14.06□□□□□ -0.16
MMP13P45452 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
MMP13P45452 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
MMP13P45452 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
MMP13P45452 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC14.06□□□□□ -0.16
MMP13P45452 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC14.06□□□□□ -0.16
MMP13P45452 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC14.06□□□□□ -0.16
MMP13P45452 RGS5-216ENST00000449680 788 ntTSL 3 BASIC14.06□□□□□ -0.16
MMP13P45452 FGFR3P1-201ENST00000449999 601 ntBASIC14.06□□□□□ -0.16
MMP13P45452 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms