Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
SSR1P43307 FAM131B-204ENST00000409578 4286 ntTSL 5 BASIC14.52□□□□□ -0.08
SSR1P43307 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
SSR1P43307 SLC6A9-205ENST00000372310 3130 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
SSR1P43307 SPOCK3-203ENST00000421836 3061 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
SSR1P43307 ZKSCAN3-203ENST00000377255 4799 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SSR1P43307 ZNF75D-202ENST00000370766 5592 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
SSR1P43307 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
SSR1P43307 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SSR1P43307 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SSR1P43307 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC14.52□□□□□ -0.09
SSR1P43307 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC14.52□□□□□ -0.09
SSR1P43307 AL008707.1-201ENST00000422498 534 ntBASIC14.52□□□□□ -0.09
SSR1P43307 AL596276.2-201ENST00000447525 331 ntBASIC14.52□□□□□ -0.09
SSR1P43307 AC073150.1-201ENST00000450406 1084 ntBASIC14.52□□□□□ -0.09
SSR1P43307 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC14.52□□□□□ -0.09
SSR1P43307 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SSR1P43307 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
SSR1P43307 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC14.52□□□□□ -0.09
SSR1P43307 ARTN-209ENST00000479128 471 ntTSL 3 BASIC14.52□□□□□ -0.09
SSR1P43307 CD81-209ENST00000492627 886 ntTSL 3 BASIC14.52□□□□□ -0.09
SSR1P43307 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
SSR1P43307 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC14.52□□□□□ -0.09
SSR1P43307 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC14.52□□□□□ -0.09
SSR1P43307 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC14.52□□□□□ -0.09
SSR1P43307 NDUFV2P1-201ENST00000596415 907 ntBASIC14.52□□□□□ -0.09
SSR1P43307 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC14.52□□□□□ -0.09
SSR1P43307 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC14.52□□□□□ -0.09
SSR1P43307 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SSR1P43307 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
SSR1P43307 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SSR1P43307 TRPM4-202ENST00000427978 3444 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SSR1P43307 ALDH18A1-202ENST00000371224 3359 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
SSR1P43307 SPATA2-202ENST00000422556 4138 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
SSR1P43307 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC14.52□□□□□ -0.09
SSR1P43307 FANCA-202ENST00000389301 5451 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
SSR1P43307 COX18-201ENST00000295890 6846 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
SSR1P43307 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
SSR1P43307 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SSR1P43307 PPP2R2C-204ENST00000506140 1780 ntTSL 2 BASIC14.52□□□□□ -0.09
SSR1P43307 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC14.52□□□□□ -0.09
SSR1P43307 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
SSR1P43307 NPHS1-202ENST00000378910 4276 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SSR1P43307 EPM2AIP1-201ENST00000322716 8126 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
SSR1P43307 RAB43-203ENST00000393305 4215 ntAPPRIS P1 TSL 4 BASIC14.52□□□□□ -0.09
SSR1P43307 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
SSR1P43307 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SSR1P43307 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SSR1P43307 AL133338.1-201ENST00000565695 1517 ntBASIC14.51□□□□□ -0.09
SSR1P43307 AC024075.2-201ENST00000598112 1473 ntBASIC14.51□□□□□ -0.09
SSR1P43307 TMEM164-204ENST00000372073 5567 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
SSR1P43307 HECW2-202ENST00000409111 6692 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SSR1P43307 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
SSR1P43307 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
SSR1P43307 ZMPSTE24-201ENST00000372759 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SSR1P43307 TPR-201ENST00000367478 9708 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SSR1P43307 RHPN1-AS1-201ENST00000518049 1918 ntBASIC14.51□□□□□ -0.09
SSR1P43307 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC14.51□□□□□ -0.09
SSR1P43307 UMPS-201ENST00000232607 6738 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SSR1P43307 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
SSR1P43307 FBN3-201ENST00000270509 9232 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SSR1P43307 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SSR1P43307 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
SSR1P43307 CACNA1C-219ENST00000399649 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
SSR1P43307 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
SSR1P43307 SAT1-201ENST00000379251 801 ntTSL 2 BASIC14.51□□□□□ -0.09
SSR1P43307 SAT1-202ENST00000379253 909 ntTSL 2 BASIC14.51□□□□□ -0.09
SSR1P43307 SAT1-203ENST00000379254 868 ntTSL 3 BASIC14.51□□□□□ -0.09
SSR1P43307 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SSR1P43307 Z97180.1-201ENST00000445173 988 ntBASIC14.51□□□□□ -0.09
SSR1P43307 AC092658.1-201ENST00000505836 891 ntBASIC14.51□□□□□ -0.09
SSR1P43307 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC14.51□□□□□ -0.09
SSR1P43307 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SSR1P43307 CFL1-212ENST00000531413 636 ntTSL 3 BASIC14.51□□□□□ -0.09
SSR1P43307 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
SSR1P43307 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC14.51□□□□□ -0.09
SSR1P43307 AL031673.1-201ENST00000611460 466 ntBASIC14.51□□□□□ -0.09
SSR1P43307 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC14.51□□□□□ -0.09
SSR1P43307 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC14.51□□□□□ -0.09
SSR1P43307 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC14.51□□□□□ -0.09
SSR1P43307 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SSR1P43307 AMDHD2-202ENST00000302956 3273 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SSR1P43307 RALGAPB-203ENST00000397042 8652 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SSR1P43307 AC012531.1-201ENST00000562848 2680 ntBASIC14.51□□□□□ -0.09
SSR1P43307 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC14.51□□□□□ -0.09
SSR1P43307 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SSR1P43307 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC14.51□□□□□ -0.09
SSR1P43307 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SSR1P43307 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
SSR1P43307 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
SSR1P43307 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SSR1P43307 SGSM3-201ENST00000248929 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SSR1P43307 ATF3-202ENST00000341491 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SSR1P43307 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
SSR1P43307 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SSR1P43307 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
SSR1P43307 PCDHB19P-202ENST00000625133 2914 ntBASIC14.51□□□□□ -0.09
SSR1P43307 PRR26-201ENST00000381489 7250 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SSR1P43307 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SSR1P43307 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms