Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 FURIN-208ENST00000640725 224 ntTSL 5 BASIC8.64□□□□□ -1.03
VPS13DQ5THJ4 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
VPS13DQ5THJ4 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
VPS13DQ5THJ4 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
VPS13DQ5THJ4 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC8.64□□□□□ -1.03
VPS13DQ5THJ4 UCK1-202ENST00000372210 2051 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
VPS13DQ5THJ4 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
VPS13DQ5THJ4 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
VPS13DQ5THJ4 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC8.64□□□□□ -1.03
VPS13DQ5THJ4 AC105219.4-201ENST00000529743 1809 ntTSL 3 BASIC8.64□□□□□ -1.03
VPS13DQ5THJ4 BEST1-208ENST00000534553 1829 ntTSL 2 BASIC8.64□□□□□ -1.03
VPS13DQ5THJ4 AACS-201ENST00000316519 3316 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
VPS13DQ5THJ4 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
VPS13DQ5THJ4 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
VPS13DQ5THJ4 TSEN15P3-201ENST00000422363 367 ntBASIC8.64□□□□□ -1.03
VPS13DQ5THJ4 LINC00618-201ENST00000435624 700 ntTSL 5 BASIC8.64□□□□□ -1.03
VPS13DQ5THJ4 ALG1L14P-201ENST00000514230 434 ntBASIC8.64□□□□□ -1.03
VPS13DQ5THJ4 LINC02354-202ENST00000548564 573 ntTSL 4 BASIC8.64□□□□□ -1.03
VPS13DQ5THJ4 AC010615.2-201ENST00000596705 566 ntTSL 4 BASIC8.64□□□□□ -1.03
VPS13DQ5THJ4 ZNF415-221ENST00000600574 563 ntTSL 3 BASIC8.64□□□□□ -1.03
VPS13DQ5THJ4 Metazoa_SRP.85-201ENST00000610909 260 ntBASIC8.64□□□□□ -1.03
VPS13DQ5THJ4 AL160408.6-201ENST00000632063 1257 ntTSL 5 BASIC8.64□□□□□ -1.03
VPS13DQ5THJ4 AC117489.1-201ENST00000625169 3217 ntBASIC8.64□□□□□ -1.03
VPS13DQ5THJ4 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC8.64□□□□□ -1.03
VPS13DQ5THJ4 MYF5-201ENST00000228644 1542 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
VPS13DQ5THJ4 EFR3B-205ENST00000405108 2432 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
VPS13DQ5THJ4 LINC00343-203ENST00000454555 1765 ntTSL 2 BASIC8.64□□□□□ -1.03
VPS13DQ5THJ4 HEBP1-203ENST00000536942 2056 ntTSL 2 BASIC8.64□□□□□ -1.03
VPS13DQ5THJ4 LINC00523-206ENST00000556697 2071 ntTSL 2 BASIC8.64□□□□□ -1.03
VPS13DQ5THJ4 HNF4A-204ENST00000415691 2302 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
VPS13DQ5THJ4 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
VPS13DQ5THJ4 BCO2-202ENST00000361053 1868 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
VPS13DQ5THJ4 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
VPS13DQ5THJ4 EML1-203ENST00000334192 4064 ntTSL 5 BASIC8.64□□□□□ -1.03
VPS13DQ5THJ4 OR10K2-201ENST00000314902 939 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
VPS13DQ5THJ4 MAL-202ENST00000349807 705 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
VPS13DQ5THJ4 RPL15P3-201ENST00000391491 615 ntBASIC8.64□□□□□ -1.03
VPS13DQ5THJ4 MORN2-205ENST00000410014 750 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
VPS13DQ5THJ4 ZFR2-203ENST00000439086 870 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
VPS13DQ5THJ4 AC118758.1-201ENST00000448242 564 ntTSL 4 BASIC8.64□□□□□ -1.03
VPS13DQ5THJ4 AL354733.3-201ENST00000448389 390 ntTSL 3 BASIC8.64□□□□□ -1.03
VPS13DQ5THJ4 AL390061.1-201ENST00000457804 293 ntTSL 2 BASIC8.64□□□□□ -1.03
VPS13DQ5THJ4 RN7SL186P-201ENST00000466485 297 ntBASIC8.64□□□□□ -1.03
VPS13DQ5THJ4 NUDT9P1-201ENST00000477230 745 ntBASIC8.64□□□□□ -1.03
VPS13DQ5THJ4 RN7SL386P-201ENST00000485776 297 ntBASIC8.64□□□□□ -1.03
VPS13DQ5THJ4 OARD1-214ENST00000486443 764 ntTSL 3 BASIC8.64□□□□□ -1.03
VPS13DQ5THJ4 ARL15-205ENST00000507646 578 ntTSL 5 BASIC8.64□□□□□ -1.03
VPS13DQ5THJ4 OR7E126P-201ENST00000526217 888 ntBASIC8.64□□□□□ -1.03
VPS13DQ5THJ4 AC009086.1-201ENST00000567219 309 ntBASIC8.64□□□□□ -1.03
VPS13DQ5THJ4 SMIM22-201ENST00000586005 366 ntAPPRIS P4 TSL 3 BASIC8.64□□□□□ -1.03
VPS13DQ5THJ4 RBM10-206ENST00000628161 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
VPS13DQ5THJ4 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
VPS13DQ5THJ4 THEMIS3P-201ENST00000416112 1586 ntBASIC8.63□□□□□ -1.03
VPS13DQ5THJ4 PAX6-217ENST00000481563 1587 ntTSL 5 BASIC8.63□□□□□ -1.03
VPS13DQ5THJ4 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC8.63□□□□□ -1.03
VPS13DQ5THJ4 CACNA1C-AS1-201ENST00000501371 2191 ntTSL 2 BASIC8.63□□□□□ -1.03
VPS13DQ5THJ4 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
VPS13DQ5THJ4 SOX30-203ENST00000519442 1666 ntAPPRIS ALT2 TSL 2 BASIC8.63□□□□□ -1.03
VPS13DQ5THJ4 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC8.63□□□□□ -1.03
VPS13DQ5THJ4 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC8.63□□□□□ -1.03
VPS13DQ5THJ4 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
VPS13DQ5THJ4 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
VPS13DQ5THJ4 MSRA-202ENST00000382490 1460 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
VPS13DQ5THJ4 AC104758.3-203ENST00000562938 2123 ntBASIC8.63□□□□□ -1.03
VPS13DQ5THJ4 ITFG1-204ENST00000544001 1849 ntTSL 2 BASIC8.63□□□□□ -1.03
VPS13DQ5THJ4 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC8.63□□□□□ -1.03
VPS13DQ5THJ4 MT1F-201ENST00000334350 690 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
VPS13DQ5THJ4 NRSN1-201ENST00000378475 800 ntTSL 3 BASIC8.63□□□□□ -1.03
VPS13DQ5THJ4 PDZD9-201ENST00000424898 1260 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
VPS13DQ5THJ4 ENTPD1-AS1-210ENST00000452942 864 ntTSL 3 BASIC8.63□□□□□ -1.03
VPS13DQ5THJ4 AC068298.1-201ENST00000465165 161 ntBASIC8.63□□□□□ -1.03
VPS13DQ5THJ4 MIR7-3HG-204ENST00000588758 865 ntTSL 3 BASIC8.63□□□□□ -1.03
VPS13DQ5THJ4 AC090236.1-201ENST00000590318 768 ntTSL 2 BASIC8.63□□□□□ -1.03
VPS13DQ5THJ4 AC025165.4-201ENST00000602327 433 ntBASIC8.63□□□□□ -1.03
VPS13DQ5THJ4 PUDPP2-202ENST00000628080 737 ntTSL 5 BASIC8.63□□□□□ -1.03
VPS13DQ5THJ4 AC009542.2-204ENST00000636543 433 ntTSL 3 BASIC8.63□□□□□ -1.03
VPS13DQ5THJ4 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
VPS13DQ5THJ4 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
VPS13DQ5THJ4 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC8.63□□□□□ -1.03
VPS13DQ5THJ4 AL662907.1-201ENST00000622988 1360 ntBASIC8.63□□□□□ -1.03
VPS13DQ5THJ4 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC8.63□□□□□ -1.03
VPS13DQ5THJ4 AGFG1-203ENST00000409171 1783 ntAPPRIS ALT1 TSL 1 (best) BASIC8.63□□□□□ -1.03
VPS13DQ5THJ4 AL590552.1-201ENST00000623164 1770 ntBASIC8.63□□□□□ -1.03
VPS13DQ5THJ4 GPM6B-203ENST00000356942 1830 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
VPS13DQ5THJ4 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
VPS13DQ5THJ4 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC8.63□□□□□ -1.03
VPS13DQ5THJ4 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
VPS13DQ5THJ4 PPATP1-201ENST00000496669 1547 ntBASIC8.63□□□□□ -1.03
VPS13DQ5THJ4 NEK3-205ENST00000610828 2396 ntAPPRIS P2 TSL 1 (best) BASIC8.63□□□□□ -1.03
VPS13DQ5THJ4 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
VPS13DQ5THJ4 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
VPS13DQ5THJ4 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
VPS13DQ5THJ4 CHCHD4P4-201ENST00000437690 327 ntBASIC8.63□□□□□ -1.03
VPS13DQ5THJ4 AL132656.1-201ENST00000452173 490 ntBASIC8.63□□□□□ -1.03
VPS13DQ5THJ4 OPRM1-211ENST00000518759 1060 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
VPS13DQ5THJ4 AP001360.1-203ENST00000524708 464 ntTSL 3 BASIC8.63□□□□□ -1.03
VPS13DQ5THJ4 LSM8-201ENST00000249299 1305 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
VPS13DQ5THJ4 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC8.63□□□□□ -1.03
VPS13DQ5THJ4 TRIM39-204ENST00000396548 3198 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
VPS13DQ5THJ4 AC106872.1-201ENST00000512492 1360 ntBASIC8.63□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 306.2 ms