Protein–RNA interactions for Protein: P35716

SOX11, Transcription factor SOX-11, humanhuman

Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX11P35716 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC13.45□□□□□ -0.26
SOX11P35716 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SOX11P35716 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SOX11P35716 SDC3-201ENST00000336798 6392 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SOX11P35716 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SOX11P35716 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SOX11P35716 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
SOX11P35716 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SOX11P35716 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC13.45□□□□□ -0.26
SOX11P35716 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC13.45□□□□□ -0.26
SOX11P35716 ITGB5-AS1-201ENST00000495917 460 ntTSL 3 BASIC13.45□□□□□ -0.26
SOX11P35716 AC003686.1-201ENST00000550956 1034 ntBASIC13.45□□□□□ -0.26
SOX11P35716 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SOX11P35716 MIR4722-201ENST00000578292 60 ntBASIC13.45□□□□□ -0.26
SOX11P35716 MIR3188-201ENST00000583494 85 ntBASIC13.45□□□□□ -0.26
SOX11P35716 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
SOX11P35716 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC13.45□□□□□ -0.26
SOX11P35716 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC13.45□□□□□ -0.26
SOX11P35716 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC13.45□□□□□ -0.26
SOX11P35716 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SOX11P35716 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SOX11P35716 AC092299.1-201ENST00000632679 757 ntBASIC13.45□□□□□ -0.26
SOX11P35716 TNRC6B-203ENST00000402203 3444 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
SOX11P35716 PDZD4-209ENST00000544474 3418 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SOX11P35716 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
SOX11P35716 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SOX11P35716 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
SOX11P35716 SLC48A1-201ENST00000442218 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SOX11P35716 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SOX11P35716 TMX1-201ENST00000457354 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SOX11P35716 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC13.45□□□□□ -0.26
SOX11P35716 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
SOX11P35716 RTL10-201ENST00000328554 6619 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
SOX11P35716 MSH6-210ENST00000540021 3930 ntTSL 2 BASIC13.45□□□□□ -0.26
SOX11P35716 NME1-209ENST00000511355 1645 ntTSL 5 BASIC13.45□□□□□ -0.26
SOX11P35716 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
SOX11P35716 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SOX11P35716 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SOX11P35716 ITGA3-201ENST00000007722 3665 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
SOX11P35716 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
SOX11P35716 BNIP3L-201ENST00000380629 3610 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SOX11P35716 ABL2-210ENST00000511413 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
SOX11P35716 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
SOX11P35716 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC13.45□□□□□ -0.26
SOX11P35716 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC13.45□□□□□ -0.26
SOX11P35716 HDAC7-202ENST00000354334 4065 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
SOX11P35716 HDAC7-201ENST00000080059 4095 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
SOX11P35716 NLRC3-202ENST00000359128 6401 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SOX11P35716 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
SOX11P35716 TRPM2-203ENST00000397928 6221 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
SOX11P35716 MCRIP1-212ENST00000576730 2979 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
SOX11P35716 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SOX11P35716 SEPT9-203ENST00000427177 3821 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
SOX11P35716 AHCYP4-201ENST00000419201 1315 ntBASIC13.44□□□□□ -0.26
SOX11P35716 FRMPD2B-201ENST00000431305 1347 ntBASIC13.44□□□□□ -0.26
SOX11P35716 PLEKHM1P1-202ENST00000578036 4318 ntTSL 2 BASIC13.44□□□□□ -0.26
SOX11P35716 POLD1-201ENST00000440232 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SOX11P35716 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
SOX11P35716 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SOX11P35716 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
SOX11P35716 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SOX11P35716 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC13.44□□□□□ -0.26
SOX11P35716 BRWD1-204ENST00000380800 7605 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SOX11P35716 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SOX11P35716 TP73-201ENST00000346387 4854 ntTSL 5 BASIC13.44□□□□□ -0.26
SOX11P35716 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SOX11P35716 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SOX11P35716 NEU3-204ENST00000531509 2468 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SOX11P35716 CFAP65-208ENST00000453220 5877 ntAPPRIS P4 TSL 5 BASIC13.44□□□□□ -0.26
SOX11P35716 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC13.44□□□□□ -0.26
SOX11P35716 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC13.44□□□□□ -0.26
SOX11P35716 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
SOX11P35716 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC13.44□□□□□ -0.26
SOX11P35716 AC136604.1-202ENST00000425471 771 ntBASIC13.44□□□□□ -0.26
SOX11P35716 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC13.44□□□□□ -0.26
SOX11P35716 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC13.44□□□□□ -0.26
SOX11P35716 PFN2-206ENST00000461930 606 ntTSL 4 BASIC13.44□□□□□ -0.26
SOX11P35716 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
SOX11P35716 AC140125.3-202ENST00000504362 348 ntTSL 3 BASIC13.44□□□□□ -0.26
SOX11P35716 AC019193.1-201ENST00000506678 823 ntBASIC13.44□□□□□ -0.26
SOX11P35716 AC138965.1-201ENST00000509329 348 ntTSL 3 BASIC13.44□□□□□ -0.26
SOX11P35716 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SOX11P35716 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC13.44□□□□□ -0.26
SOX11P35716 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
SOX11P35716 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC13.44□□□□□ -0.26
SOX11P35716 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
SOX11P35716 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SOX11P35716 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC13.44□□□□□ -0.26
SOX11P35716 SNX22-201ENST00000325881 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SOX11P35716 GRM7-201ENST00000357716 4127 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
SOX11P35716 TBC1D3J-201ENST00000620719 1426 ntBASIC13.44□□□□□ -0.26
SOX11P35716 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC13.44□□□□□ -0.26
SOX11P35716 DOT1L-201ENST00000398665 7436 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SOX11P35716 SYMPK-214ENST00000599814 6537 ntTSL 2 BASIC13.44□□□□□ -0.26
SOX11P35716 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
SOX11P35716 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SOX11P35716 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SOX11P35716 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC13.44□□□□□ -0.26
SOX11P35716 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC13.44□□□□□ -0.26
SOX11P35716 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms