Protein–RNA interactions for Protein: Q9Y4Y9

LSM5, U6 snRNA-associated Sm-like protein LSm5, humanhuman

Known RBP Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5Q9Y4Y9 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
LSM5Q9Y4Y9 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LSM5Q9Y4Y9 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LSM5Q9Y4Y9 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LSM5Q9Y4Y9 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LSM5Q9Y4Y9 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LSM5Q9Y4Y9 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LSM5Q9Y4Y9 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC18.28■□□□□ 0.52
LSM5Q9Y4Y9 AC092296.2-201ENST00000589470 999 ntBASIC18.28■□□□□ 0.52
LSM5Q9Y4Y9 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LSM5Q9Y4Y9 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.28■□□□□ 0.52
LSM5Q9Y4Y9 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LSM5Q9Y4Y9 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
LSM5Q9Y4Y9 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LSM5Q9Y4Y9 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.28■□□□□ 0.52
LSM5Q9Y4Y9 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LSM5Q9Y4Y9 AL022069.1-201ENST00000568025 1636 ntBASIC18.27■□□□□ 0.52
LSM5Q9Y4Y9 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LSM5Q9Y4Y9 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
LSM5Q9Y4Y9 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LSM5Q9Y4Y9 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LSM5Q9Y4Y9 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC18.27■□□□□ 0.52
LSM5Q9Y4Y9 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC18.27■□□□□ 0.52
LSM5Q9Y4Y9 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC18.27■□□□□ 0.52
LSM5Q9Y4Y9 GDI1-215ENST00000630693 786 ntTSL 4 BASIC18.27■□□□□ 0.52
LSM5Q9Y4Y9 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
LSM5Q9Y4Y9 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC18.26■□□□□ 0.51
LSM5Q9Y4Y9 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LSM5Q9Y4Y9 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC18.26■□□□□ 0.51
LSM5Q9Y4Y9 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LSM5Q9Y4Y9 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.26■□□□□ 0.51
LSM5Q9Y4Y9 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
LSM5Q9Y4Y9 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LSM5Q9Y4Y9 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LSM5Q9Y4Y9 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
LSM5Q9Y4Y9 MLEC-202ENST00000412616 841 ntTSL 3 BASIC18.26■□□□□ 0.51
LSM5Q9Y4Y9 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC18.26■□□□□ 0.51
LSM5Q9Y4Y9 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LSM5Q9Y4Y9 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LSM5Q9Y4Y9 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
LSM5Q9Y4Y9 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LSM5Q9Y4Y9 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.26■□□□□ 0.51
LSM5Q9Y4Y9 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
LSM5Q9Y4Y9 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.25■□□□□ 0.51
LSM5Q9Y4Y9 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
LSM5Q9Y4Y9 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LSM5Q9Y4Y9 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
LSM5Q9Y4Y9 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
LSM5Q9Y4Y9 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
LSM5Q9Y4Y9 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
LSM5Q9Y4Y9 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LSM5Q9Y4Y9 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
LSM5Q9Y4Y9 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
LSM5Q9Y4Y9 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LSM5Q9Y4Y9 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC18.25■□□□□ 0.51
LSM5Q9Y4Y9 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
LSM5Q9Y4Y9 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.25■□□□□ 0.51
LSM5Q9Y4Y9 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
LSM5Q9Y4Y9 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LSM5Q9Y4Y9 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LSM5Q9Y4Y9 EI24-204ENST00000527235 1625 ntTSL 5 BASIC18.24■□□□□ 0.51
LSM5Q9Y4Y9 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
LSM5Q9Y4Y9 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LSM5Q9Y4Y9 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LSM5Q9Y4Y9 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LSM5Q9Y4Y9 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LSM5Q9Y4Y9 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC18.24■□□□□ 0.51
LSM5Q9Y4Y9 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LSM5Q9Y4Y9 ECEL1P2-201ENST00000461596 1295 ntBASIC18.24■□□□□ 0.51
LSM5Q9Y4Y9 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LSM5Q9Y4Y9 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LSM5Q9Y4Y9 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
LSM5Q9Y4Y9 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
LSM5Q9Y4Y9 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
LSM5Q9Y4Y9 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
LSM5Q9Y4Y9 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LSM5Q9Y4Y9 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LSM5Q9Y4Y9 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LSM5Q9Y4Y9 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LSM5Q9Y4Y9 ALDH1A3-203ENST00000557963 1670 ntBASIC18.23■□□□□ 0.51
LSM5Q9Y4Y9 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC18.23■□□□□ 0.51
LSM5Q9Y4Y9 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
LSM5Q9Y4Y9 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
LSM5Q9Y4Y9 MIR3648-2-201ENST00000581792 180 ntBASIC18.23■□□□□ 0.51
LSM5Q9Y4Y9 MIR3648-1-201ENST00000615959 180 ntBASIC18.23■□□□□ 0.51
LSM5Q9Y4Y9 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
LSM5Q9Y4Y9 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LSM5Q9Y4Y9 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
LSM5Q9Y4Y9 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LSM5Q9Y4Y9 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
LSM5Q9Y4Y9 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.23■□□□□ 0.51
LSM5Q9Y4Y9 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LSM5Q9Y4Y9 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
LSM5Q9Y4Y9 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LSM5Q9Y4Y9 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
LSM5Q9Y4Y9 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
LSM5Q9Y4Y9 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LSM5Q9Y4Y9 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LSM5Q9Y4Y9 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LSM5Q9Y4Y9 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms