Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
AP1S3Q96PC3 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
AP1S3Q96PC3 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP1S3Q96PC3 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP1S3Q96PC3 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
AP1S3Q96PC3 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP1S3Q96PC3 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
AP1S3Q96PC3 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC16.7■□□□□ 0.26
AP1S3Q96PC3 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP1S3Q96PC3 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP1S3Q96PC3 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
AP1S3Q96PC3 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC16.7■□□□□ 0.26
AP1S3Q96PC3 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC16.7■□□□□ 0.26
AP1S3Q96PC3 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP1S3Q96PC3 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP1S3Q96PC3 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP1S3Q96PC3 AIRN-201ENST00000601203 4374 ntBASIC16.7■□□□□ 0.26
AP1S3Q96PC3 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP1S3Q96PC3 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC16.7■□□□□ 0.26
AP1S3Q96PC3 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP1S3Q96PC3 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP1S3Q96PC3 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC16.69■□□□□ 0.26
AP1S3Q96PC3 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
AP1S3Q96PC3 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
AP1S3Q96PC3 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
AP1S3Q96PC3 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
AP1S3Q96PC3 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
AP1S3Q96PC3 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP1S3Q96PC3 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
AP1S3Q96PC3 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP1S3Q96PC3 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP1S3Q96PC3 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP1S3Q96PC3 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC16.69■□□□□ 0.26
AP1S3Q96PC3 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP1S3Q96PC3 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC16.68■□□□□ 0.26
AP1S3Q96PC3 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
AP1S3Q96PC3 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
AP1S3Q96PC3 AC007029.1-201ENST00000604183 313 ntBASIC16.68■□□□□ 0.26
AP1S3Q96PC3 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC16.68■□□□□ 0.26
AP1S3Q96PC3 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
AP1S3Q96PC3 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
AP1S3Q96PC3 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
AP1S3Q96PC3 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
AP1S3Q96PC3 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
AP1S3Q96PC3 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
AP1S3Q96PC3 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
AP1S3Q96PC3 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC16.68■□□□□ 0.26
AP1S3Q96PC3 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
AP1S3Q96PC3 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
AP1S3Q96PC3 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
AP1S3Q96PC3 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
AP1S3Q96PC3 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
AP1S3Q96PC3 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC16.67■□□□□ 0.26
AP1S3Q96PC3 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC16.67■□□□□ 0.26
AP1S3Q96PC3 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
AP1S3Q96PC3 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
AP1S3Q96PC3 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
AP1S3Q96PC3 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
AP1S3Q96PC3 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
AP1S3Q96PC3 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
AP1S3Q96PC3 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
AP1S3Q96PC3 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
AP1S3Q96PC3 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC16.67■□□□□ 0.26
AP1S3Q96PC3 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC16.67■□□□□ 0.26
AP1S3Q96PC3 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
AP1S3Q96PC3 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
AP1S3Q96PC3 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
AP1S3Q96PC3 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
AP1S3Q96PC3 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
AP1S3Q96PC3 STK25-234ENST00000535007 2459 ntTSL 2 BASIC16.67■□□□□ 0.26
AP1S3Q96PC3 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
AP1S3Q96PC3 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
AP1S3Q96PC3 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC16.66■□□□□ 0.26
AP1S3Q96PC3 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
AP1S3Q96PC3 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
AP1S3Q96PC3 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
AP1S3Q96PC3 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
AP1S3Q96PC3 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
AP1S3Q96PC3 GFER-205ENST00000569451 517 ntTSL 5 BASIC16.66■□□□□ 0.26
AP1S3Q96PC3 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
AP1S3Q96PC3 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
AP1S3Q96PC3 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
AP1S3Q96PC3 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC16.66■□□□□ 0.26
AP1S3Q96PC3 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
AP1S3Q96PC3 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC16.66■□□□□ 0.26
AP1S3Q96PC3 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC16.66■□□□□ 0.26
AP1S3Q96PC3 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
AP1S3Q96PC3 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
AP1S3Q96PC3 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
AP1S3Q96PC3 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC16.65■□□□□ 0.26
AP1S3Q96PC3 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
AP1S3Q96PC3 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC16.65■□□□□ 0.26
AP1S3Q96PC3 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
AP1S3Q96PC3 AC022413.1-201ENST00000624602 984 ntBASIC16.65■□□□□ 0.26
AP1S3Q96PC3 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC16.65■□□□□ 0.26
AP1S3Q96PC3 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
AP1S3Q96PC3 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
AP1S3Q96PC3 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
AP1S3Q96PC3 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
AP1S3Q96PC3 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms