Protein–RNA interactions for Protein: Q96HR8

NAF1, H/ACA ribonucleoprotein complex non-core subunit NAF1, humanhuman

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NAF1Q96HR8 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
NAF1Q96HR8 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
NAF1Q96HR8 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
NAF1Q96HR8 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC22.28■■□□□ 1.16
NAF1Q96HR8 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC22.27■■□□□ 1.16
NAF1Q96HR8 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
NAF1Q96HR8 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC22.27■■□□□ 1.16
NAF1Q96HR8 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
NAF1Q96HR8 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
NAF1Q96HR8 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
NAF1Q96HR8 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
NAF1Q96HR8 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC22.26■■□□□ 1.15
NAF1Q96HR8 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC22.26■■□□□ 1.15
NAF1Q96HR8 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
NAF1Q96HR8 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
NAF1Q96HR8 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
NAF1Q96HR8 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
NAF1Q96HR8 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
NAF1Q96HR8 AL121603.2-201ENST00000557373 2117 ntBASIC22.25■■□□□ 1.15
NAF1Q96HR8 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC22.25■■□□□ 1.15
NAF1Q96HR8 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
NAF1Q96HR8 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC22.25■■□□□ 1.15
NAF1Q96HR8 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
NAF1Q96HR8 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
NAF1Q96HR8 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
NAF1Q96HR8 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC22.25■■□□□ 1.15
NAF1Q96HR8 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
NAF1Q96HR8 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC22.25■■□□□ 1.15
NAF1Q96HR8 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
NAF1Q96HR8 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
NAF1Q96HR8 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
NAF1Q96HR8 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
NAF1Q96HR8 AF131216.4-201ENST00000638924 1588 ntBASIC22.25■■□□□ 1.15
NAF1Q96HR8 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
NAF1Q96HR8 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
NAF1Q96HR8 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
NAF1Q96HR8 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC22.24■■□□□ 1.15
NAF1Q96HR8 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
NAF1Q96HR8 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
NAF1Q96HR8 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC22.24■■□□□ 1.15
NAF1Q96HR8 SUDS3P1-201ENST00000505831 966 ntBASIC22.24■■□□□ 1.15
NAF1Q96HR8 AL031432.3-201ENST00000607698 485 ntBASIC22.24■■□□□ 1.15
NAF1Q96HR8 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC22.24■■□□□ 1.15
NAF1Q96HR8 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC22.24■■□□□ 1.15
NAF1Q96HR8 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
NAF1Q96HR8 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC22.24■■□□□ 1.15
NAF1Q96HR8 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC22.23■■□□□ 1.15
NAF1Q96HR8 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC22.23■■□□□ 1.15
NAF1Q96HR8 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
NAF1Q96HR8 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
NAF1Q96HR8 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC22.23■■□□□ 1.15
NAF1Q96HR8 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
NAF1Q96HR8 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC22.23■■□□□ 1.15
NAF1Q96HR8 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC22.23■■□□□ 1.15
NAF1Q96HR8 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
NAF1Q96HR8 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
NAF1Q96HR8 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
NAF1Q96HR8 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
NAF1Q96HR8 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
NAF1Q96HR8 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC22.23■■□□□ 1.15
NAF1Q96HR8 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC22.23■■□□□ 1.15
NAF1Q96HR8 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
NAF1Q96HR8 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
NAF1Q96HR8 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC22.22■■□□□ 1.15
NAF1Q96HR8 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
NAF1Q96HR8 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
NAF1Q96HR8 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
NAF1Q96HR8 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC22.22■■□□□ 1.15
NAF1Q96HR8 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
NAF1Q96HR8 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC22.22■■□□□ 1.15
NAF1Q96HR8 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC22.22■■□□□ 1.15
NAF1Q96HR8 AL137060.1-201ENST00000618151 2648 ntBASIC22.22■■□□□ 1.15
NAF1Q96HR8 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
NAF1Q96HR8 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
NAF1Q96HR8 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
NAF1Q96HR8 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
NAF1Q96HR8 AC105265.2-201ENST00000467189 838 ntBASIC22.21■■□□□ 1.15
NAF1Q96HR8 AC024257.2-201ENST00000549699 147 ntBASIC22.21■■□□□ 1.15
NAF1Q96HR8 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC22.21■■□□□ 1.15
NAF1Q96HR8 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
NAF1Q96HR8 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
NAF1Q96HR8 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
NAF1Q96HR8 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC22.21■■□□□ 1.15
NAF1Q96HR8 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
NAF1Q96HR8 FOXO3B-201ENST00000395675 1928 ntBASIC22.2■■□□□ 1.14
NAF1Q96HR8 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
NAF1Q96HR8 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
NAF1Q96HR8 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC22.2■■□□□ 1.14
NAF1Q96HR8 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC22.2■■□□□ 1.14
NAF1Q96HR8 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC22.2■■□□□ 1.14
NAF1Q96HR8 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
NAF1Q96HR8 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
NAF1Q96HR8 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
NAF1Q96HR8 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
NAF1Q96HR8 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC22.19■■□□□ 1.14
NAF1Q96HR8 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
NAF1Q96HR8 PARL-206ENST00000435888 1098 ntTSL 5 BASIC22.19■■□□□ 1.14
NAF1Q96HR8 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC22.19■■□□□ 1.14
NAF1Q96HR8 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
NAF1Q96HR8 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms