Protein–RNA interactions for Protein: Q8NEU8

APPL2, DCC-interacting protein 13-beta, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPL2Q8NEU8 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
APPL2Q8NEU8 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
APPL2Q8NEU8 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
APPL2Q8NEU8 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
APPL2Q8NEU8 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC23.84■■□□□ 1.41
APPL2Q8NEU8 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC23.83■■□□□ 1.41
APPL2Q8NEU8 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
APPL2Q8NEU8 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
APPL2Q8NEU8 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
APPL2Q8NEU8 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
APPL2Q8NEU8 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
APPL2Q8NEU8 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
APPL2Q8NEU8 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC23.83■■□□□ 1.41
APPL2Q8NEU8 IRS3P-201ENST00000223076 1006 ntBASIC23.83■■□□□ 1.41
APPL2Q8NEU8 AC126544.1-201ENST00000580842 1059 ntBASIC23.83■■□□□ 1.41
APPL2Q8NEU8 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
APPL2Q8NEU8 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC23.83■■□□□ 1.41
APPL2Q8NEU8 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
APPL2Q8NEU8 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC23.83■■□□□ 1.4
APPL2Q8NEU8 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
APPL2Q8NEU8 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
APPL2Q8NEU8 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
APPL2Q8NEU8 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
APPL2Q8NEU8 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
APPL2Q8NEU8 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
APPL2Q8NEU8 AL353803.4-201ENST00000565882 1934 ntBASIC23.82■■□□□ 1.4
APPL2Q8NEU8 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
APPL2Q8NEU8 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC23.82■■□□□ 1.4
APPL2Q8NEU8 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
APPL2Q8NEU8 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
APPL2Q8NEU8 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC23.81■■□□□ 1.4
APPL2Q8NEU8 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
APPL2Q8NEU8 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC23.81■■□□□ 1.4
APPL2Q8NEU8 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
APPL2Q8NEU8 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC23.81■■□□□ 1.4
APPL2Q8NEU8 SLC47A1P1-202ENST00000449666 945 ntBASIC23.81■■□□□ 1.4
APPL2Q8NEU8 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
APPL2Q8NEU8 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC23.81■■□□□ 1.4
APPL2Q8NEU8 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
APPL2Q8NEU8 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC23.81■■□□□ 1.4
APPL2Q8NEU8 ANOS2P-203ENST00000472227 1816 ntBASIC23.81■■□□□ 1.4
APPL2Q8NEU8 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
APPL2Q8NEU8 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
APPL2Q8NEU8 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC23.8■■□□□ 1.4
APPL2Q8NEU8 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
APPL2Q8NEU8 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
APPL2Q8NEU8 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
APPL2Q8NEU8 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
APPL2Q8NEU8 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
APPL2Q8NEU8 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC23.8■■□□□ 1.4
APPL2Q8NEU8 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC23.8■■□□□ 1.4
APPL2Q8NEU8 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
APPL2Q8NEU8 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
APPL2Q8NEU8 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
APPL2Q8NEU8 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC23.79■■□□□ 1.4
APPL2Q8NEU8 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
APPL2Q8NEU8 AC026271.2-201ENST00000428091 497 ntBASIC23.79■■□□□ 1.4
APPL2Q8NEU8 RHOF-204ENST00000537265 699 ntTSL 2 BASIC23.79■■□□□ 1.4
APPL2Q8NEU8 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
APPL2Q8NEU8 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
APPL2Q8NEU8 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
APPL2Q8NEU8 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC23.79■■□□□ 1.4
APPL2Q8NEU8 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC23.79■■□□□ 1.4
APPL2Q8NEU8 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
APPL2Q8NEU8 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC23.78■■□□□ 1.4
APPL2Q8NEU8 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
APPL2Q8NEU8 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
APPL2Q8NEU8 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
APPL2Q8NEU8 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
APPL2Q8NEU8 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
APPL2Q8NEU8 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC23.78■■□□□ 1.4
APPL2Q8NEU8 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
APPL2Q8NEU8 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
APPL2Q8NEU8 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
APPL2Q8NEU8 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC23.77■■□□□ 1.4
APPL2Q8NEU8 AICDA-202ENST00000537228 667 ntTSL 5 BASIC23.77■■□□□ 1.4
APPL2Q8NEU8 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
APPL2Q8NEU8 AC092068.2-201ENST00000590491 1708 ntBASIC23.76■■□□□ 1.39
APPL2Q8NEU8 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
APPL2Q8NEU8 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
APPL2Q8NEU8 OR2I1P-207ENST00000453522 948 ntBASIC23.76■■□□□ 1.39
APPL2Q8NEU8 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC23.76■■□□□ 1.39
APPL2Q8NEU8 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
APPL2Q8NEU8 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC23.76■■□□□ 1.39
APPL2Q8NEU8 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
APPL2Q8NEU8 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC23.76■■□□□ 1.39
APPL2Q8NEU8 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
APPL2Q8NEU8 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
APPL2Q8NEU8 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
APPL2Q8NEU8 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC23.75■■□□□ 1.39
APPL2Q8NEU8 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
APPL2Q8NEU8 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
APPL2Q8NEU8 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC23.75■■□□□ 1.39
APPL2Q8NEU8 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
APPL2Q8NEU8 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC23.75■■□□□ 1.39
APPL2Q8NEU8 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
APPL2Q8NEU8 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
APPL2Q8NEU8 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC23.75■■□□□ 1.39
APPL2Q8NEU8 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC23.75■■□□□ 1.39
APPL2Q8NEU8 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms