Protein–RNA interactions for Protein: Q8N9S9

SNX31, Sorting nexin-31, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX31Q8N9S9 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SNX31Q8N9S9 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.85■■□□□ 1.09
SNX31Q8N9S9 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.85■■□□□ 1.09
SNX31Q8N9S9 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SNX31Q8N9S9 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.85■■□□□ 1.09
SNX31Q8N9S9 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.85■■□□□ 1.09
SNX31Q8N9S9 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SNX31Q8N9S9 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SNX31Q8N9S9 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
SNX31Q8N9S9 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SNX31Q8N9S9 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SNX31Q8N9S9 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SNX31Q8N9S9 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.84■■□□□ 1.09
SNX31Q8N9S9 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
SNX31Q8N9S9 TSPY9P-201ENST00000440215 945 ntBASIC21.84■■□□□ 1.09
SNX31Q8N9S9 TSPY11P-201ENST00000442607 1045 ntBASIC21.84■■□□□ 1.09
SNX31Q8N9S9 MTDHP2-201ENST00000601468 714 ntBASIC21.84■■□□□ 1.09
SNX31Q8N9S9 AC079630.1-202ENST00000618127 1840 ntBASIC21.84■■□□□ 1.09
SNX31Q8N9S9 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SNX31Q8N9S9 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.83■■□□□ 1.09
SNX31Q8N9S9 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
SNX31Q8N9S9 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SNX31Q8N9S9 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
SNX31Q8N9S9 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
SNX31Q8N9S9 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
SNX31Q8N9S9 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
SNX31Q8N9S9 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.82■■□□□ 1.08
SNX31Q8N9S9 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
SNX31Q8N9S9 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SNX31Q8N9S9 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SNX31Q8N9S9 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SNX31Q8N9S9 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SNX31Q8N9S9 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.82■■□□□ 1.08
SNX31Q8N9S9 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
SNX31Q8N9S9 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SNX31Q8N9S9 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SNX31Q8N9S9 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SNX31Q8N9S9 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SNX31Q8N9S9 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SNX31Q8N9S9 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SNX31Q8N9S9 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SNX31Q8N9S9 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SNX31Q8N9S9 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.81■■□□□ 1.08
SNX31Q8N9S9 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.81■■□□□ 1.08
SNX31Q8N9S9 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.81■■□□□ 1.08
SNX31Q8N9S9 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.81■■□□□ 1.08
SNX31Q8N9S9 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SNX31Q8N9S9 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SNX31Q8N9S9 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SNX31Q8N9S9 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SNX31Q8N9S9 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SNX31Q8N9S9 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.8■■□□□ 1.08
SNX31Q8N9S9 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SNX31Q8N9S9 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SNX31Q8N9S9 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.8■■□□□ 1.08
SNX31Q8N9S9 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.8■■□□□ 1.08
SNX31Q8N9S9 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SNX31Q8N9S9 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SNX31Q8N9S9 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SNX31Q8N9S9 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SNX31Q8N9S9 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.79■■□□□ 1.08
SNX31Q8N9S9 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SNX31Q8N9S9 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SNX31Q8N9S9 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SNX31Q8N9S9 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.79■■□□□ 1.08
SNX31Q8N9S9 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SNX31Q8N9S9 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SNX31Q8N9S9 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SNX31Q8N9S9 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SNX31Q8N9S9 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
SNX31Q8N9S9 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SNX31Q8N9S9 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SNX31Q8N9S9 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.78■■□□□ 1.08
SNX31Q8N9S9 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SNX31Q8N9S9 AC010997.5-201ENST00000609182 354 ntBASIC21.78■■□□□ 1.08
SNX31Q8N9S9 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.78■■□□□ 1.08
SNX31Q8N9S9 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SNX31Q8N9S9 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SNX31Q8N9S9 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
SNX31Q8N9S9 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SNX31Q8N9S9 GUSBP5-202ENST00000510805 1989 ntBASIC21.78■■□□□ 1.08
SNX31Q8N9S9 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SNX31Q8N9S9 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SNX31Q8N9S9 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SNX31Q8N9S9 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SNX31Q8N9S9 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.77■■□□□ 1.08
SNX31Q8N9S9 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SNX31Q8N9S9 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.77■■□□□ 1.08
SNX31Q8N9S9 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.77■■□□□ 1.08
SNX31Q8N9S9 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SNX31Q8N9S9 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
SNX31Q8N9S9 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SNX31Q8N9S9 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
SNX31Q8N9S9 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.77■■□□□ 1.08
SNX31Q8N9S9 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SNX31Q8N9S9 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
SNX31Q8N9S9 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SNX31Q8N9S9 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
SNX31Q8N9S9 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SNX31Q8N9S9 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms