Protein–RNA interactions for Protein: Q5SRH9

TTC39A, Tetratricopeptide repeat protein 39A, humanhuman

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39AQ5SRH9 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
TTC39AQ5SRH9 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC27.12■■□□□ 1.93
TTC39AQ5SRH9 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC27.12■■□□□ 1.93
TTC39AQ5SRH9 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
TTC39AQ5SRH9 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
TTC39AQ5SRH9 SNX3-202ENST00000349379 890 ntTSL 2 BASIC27.12■■□□□ 1.93
TTC39AQ5SRH9 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
TTC39AQ5SRH9 AC099791.1-201ENST00000416440 715 ntBASIC27.12■■□□□ 1.93
TTC39AQ5SRH9 BX842568.3-201ENST00000418104 571 ntBASIC27.12■■□□□ 1.93
TTC39AQ5SRH9 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC27.12■■□□□ 1.93
TTC39AQ5SRH9 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC27.12■■□□□ 1.93
TTC39AQ5SRH9 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
TTC39AQ5SRH9 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC27.12■■□□□ 1.93
TTC39AQ5SRH9 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC27.12■■□□□ 1.93
TTC39AQ5SRH9 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC27.12■■□□□ 1.93
TTC39AQ5SRH9 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC27.12■■□□□ 1.93
TTC39AQ5SRH9 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC27.11■■□□□ 1.93
TTC39AQ5SRH9 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC27.11■■□□□ 1.93
TTC39AQ5SRH9 AC233992.3-201ENST00000607491 485 ntBASIC27.11■■□□□ 1.93
TTC39AQ5SRH9 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
TTC39AQ5SRH9 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC27.11■■□□□ 1.93
TTC39AQ5SRH9 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
TTC39AQ5SRH9 RASA4CP-201ENST00000424092 1398 ntBASIC27.1■■□□□ 1.93
TTC39AQ5SRH9 AC092068.2-201ENST00000590491 1708 ntBASIC27.1■■□□□ 1.93
TTC39AQ5SRH9 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC27.1■■□□□ 1.93
TTC39AQ5SRH9 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
TTC39AQ5SRH9 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC27.1■■□□□ 1.93
TTC39AQ5SRH9 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
TTC39AQ5SRH9 SLC47A1P1-202ENST00000449666 945 ntBASIC27.1■■□□□ 1.93
TTC39AQ5SRH9 CA15P2-201ENST00000611168 834 ntBASIC27.1■■□□□ 1.93
TTC39AQ5SRH9 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
TTC39AQ5SRH9 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
TTC39AQ5SRH9 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC27.1■■□□□ 1.93
TTC39AQ5SRH9 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC27.1■■□□□ 1.93
TTC39AQ5SRH9 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC27.1■■□□□ 1.93
TTC39AQ5SRH9 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
TTC39AQ5SRH9 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC27.09■■□□□ 1.93
TTC39AQ5SRH9 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
TTC39AQ5SRH9 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
TTC39AQ5SRH9 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC27.09■■□□□ 1.93
TTC39AQ5SRH9 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
TTC39AQ5SRH9 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC27.09■■□□□ 1.93
TTC39AQ5SRH9 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC27.09■■□□□ 1.93
TTC39AQ5SRH9 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC27.09■■□□□ 1.93
TTC39AQ5SRH9 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC27.09■■□□□ 1.93
TTC39AQ5SRH9 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
TTC39AQ5SRH9 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
TTC39AQ5SRH9 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC27.08■■□□□ 1.93
TTC39AQ5SRH9 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC27.08■■□□□ 1.93
TTC39AQ5SRH9 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
TTC39AQ5SRH9 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
TTC39AQ5SRH9 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
TTC39AQ5SRH9 AC105265.2-201ENST00000467189 838 ntBASIC27.08■■□□□ 1.93
TTC39AQ5SRH9 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
TTC39AQ5SRH9 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC27.08■■□□□ 1.93
TTC39AQ5SRH9 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC27.08■■□□□ 1.93
TTC39AQ5SRH9 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC27.08■■□□□ 1.93
TTC39AQ5SRH9 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
TTC39AQ5SRH9 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
TTC39AQ5SRH9 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
TTC39AQ5SRH9 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
TTC39AQ5SRH9 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC27.07■■□□□ 1.92
TTC39AQ5SRH9 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC27.07■■□□□ 1.92
TTC39AQ5SRH9 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC27.07■■□□□ 1.92
TTC39AQ5SRH9 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC27.07■■□□□ 1.92
TTC39AQ5SRH9 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
TTC39AQ5SRH9 THRA-202ENST00000394121 2260 ntTSL 2 BASIC27.06■■□□□ 1.92
TTC39AQ5SRH9 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
TTC39AQ5SRH9 AC004687.1-201ENST00000579003 1625 ntBASIC27.06■■□□□ 1.92
TTC39AQ5SRH9 ZNRF2P3-201ENST00000424200 374 ntBASIC27.06■■□□□ 1.92
TTC39AQ5SRH9 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC27.06■■□□□ 1.92
TTC39AQ5SRH9 STOX2-205ENST00000513034 807 ntTSL 3 BASIC27.06■■□□□ 1.92
TTC39AQ5SRH9 AC010525.1-201ENST00000585559 441 ntBASIC27.06■■□□□ 1.92
TTC39AQ5SRH9 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC27.06■■□□□ 1.92
TTC39AQ5SRH9 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
TTC39AQ5SRH9 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC27.05■■□□□ 1.92
TTC39AQ5SRH9 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
TTC39AQ5SRH9 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC27.05■■□□□ 1.92
TTC39AQ5SRH9 OR2I1P-207ENST00000453522 948 ntBASIC27.05■■□□□ 1.92
TTC39AQ5SRH9 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC27.05■■□□□ 1.92
TTC39AQ5SRH9 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC27.05■■□□□ 1.92
TTC39AQ5SRH9 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
TTC39AQ5SRH9 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
TTC39AQ5SRH9 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
TTC39AQ5SRH9 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
TTC39AQ5SRH9 GUK1-205ENST00000366722 850 ntTSL 3 BASIC27.04■■□□□ 1.92
TTC39AQ5SRH9 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC27.04■■□□□ 1.92
TTC39AQ5SRH9 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC27.04■■□□□ 1.92
TTC39AQ5SRH9 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC27.04■■□□□ 1.92
TTC39AQ5SRH9 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC27.04■■□□□ 1.92
TTC39AQ5SRH9 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC27.04■■□□□ 1.92
TTC39AQ5SRH9 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC27.03■■□□□ 1.92
TTC39AQ5SRH9 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC27.03■■□□□ 1.92
TTC39AQ5SRH9 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
TTC39AQ5SRH9 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
TTC39AQ5SRH9 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
TTC39AQ5SRH9 GRAMD4P2-201ENST00000423297 1097 ntBASIC27.03■■□□□ 1.92
TTC39AQ5SRH9 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC27.03■■□□□ 1.92
TTC39AQ5SRH9 AC126544.1-201ENST00000580842 1059 ntBASIC27.03■■□□□ 1.92
TTC39AQ5SRH9 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC27.02■■□□□ 1.92
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms