Protein–RNA interactions for Protein: P40227

CCT6A, T-complex protein 1 subunit zeta, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCT6AP40227 VGF-203ENST00000611537 1622 ntTSL 5 BASIC25.1■■□□□ 1.61
CCT6AP40227 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
CCT6AP40227 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC25.1■■□□□ 1.61
CCT6AP40227 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
CCT6AP40227 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CCT6AP40227 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CCT6AP40227 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CCT6AP40227 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
CCT6AP40227 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC25.09■■□□□ 1.61
CCT6AP40227 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC25.09■■□□□ 1.61
CCT6AP40227 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CCT6AP40227 SRD5A1P1-201ENST00000442297 786 ntBASIC25.09■■□□□ 1.61
CCT6AP40227 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC25.09■■□□□ 1.61
CCT6AP40227 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
CCT6AP40227 LINC01529-204ENST00000636474 1715 ntBASIC25.09■■□□□ 1.61
CCT6AP40227 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CCT6AP40227 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
CCT6AP40227 DUSP8P3-201ENST00000399571 1760 ntBASIC25.08■■□□□ 1.61
CCT6AP40227 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC25.08■■□□□ 1.61
CCT6AP40227 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CCT6AP40227 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC25.08■■□□□ 1.61
CCT6AP40227 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
CCT6AP40227 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
CCT6AP40227 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.6
CCT6AP40227 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
CCT6AP40227 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
CCT6AP40227 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
CCT6AP40227 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC25.07■■□□□ 1.6
CCT6AP40227 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC25.07■■□□□ 1.6
CCT6AP40227 GALC-202ENST00000393568 2054 ntTSL 2 BASIC25.07■■□□□ 1.6
CCT6AP40227 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CCT6AP40227 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC25.07■■□□□ 1.6
CCT6AP40227 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CCT6AP40227 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC25.06■■□□□ 1.6
CCT6AP40227 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC25.06■■□□□ 1.6
CCT6AP40227 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
CCT6AP40227 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
CCT6AP40227 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC25.06■■□□□ 1.6
CCT6AP40227 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CCT6AP40227 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC25.06■■□□□ 1.6
CCT6AP40227 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
CCT6AP40227 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC25.05■■□□□ 1.6
CCT6AP40227 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CCT6AP40227 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC25.05■■□□□ 1.6
CCT6AP40227 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CCT6AP40227 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CCT6AP40227 AL136116.3-201ENST00000402907 1138 ntBASIC25.05■■□□□ 1.6
CCT6AP40227 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
CCT6AP40227 AC099791.2-201ENST00000605725 427 ntBASIC25.05■■□□□ 1.6
CCT6AP40227 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC25.05■■□□□ 1.6
CCT6AP40227 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC25.05■■□□□ 1.6
CCT6AP40227 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CCT6AP40227 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC25.05■■□□□ 1.6
CCT6AP40227 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CCT6AP40227 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC25.04■■□□□ 1.6
CCT6AP40227 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
CCT6AP40227 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
CCT6AP40227 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC25.04■■□□□ 1.6
CCT6AP40227 DUX4L4-201ENST00000566884 1269 ntBASIC25.04■■□□□ 1.6
CCT6AP40227 AC241377.3-202ENST00000626088 1088 ntBASIC25.04■■□□□ 1.6
CCT6AP40227 AC241585.3-202ENST00000628937 1088 ntBASIC25.04■■□□□ 1.6
CCT6AP40227 AC245100.8-202ENST00000629247 1058 ntBASIC25.04■■□□□ 1.6
CCT6AP40227 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC25.04■■□□□ 1.6
CCT6AP40227 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC25.04■■□□□ 1.6
CCT6AP40227 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
CCT6AP40227 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CCT6AP40227 AC008406.3-201ENST00000620001 1374 ntBASIC25.04■■□□□ 1.6
CCT6AP40227 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CCT6AP40227 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC25.03■■□□□ 1.6
CCT6AP40227 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
CCT6AP40227 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC25.03■■□□□ 1.6
CCT6AP40227 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
CCT6AP40227 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
CCT6AP40227 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC25.03■■□□□ 1.6
CCT6AP40227 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CCT6AP40227 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CCT6AP40227 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
CCT6AP40227 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
CCT6AP40227 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC25.02■■□□□ 1.6
CCT6AP40227 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC25.02■■□□□ 1.6
CCT6AP40227 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC25.02■■□□□ 1.6
CCT6AP40227 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
CCT6AP40227 AC006455.2-201ENST00000429931 906 ntBASIC25.02■■□□□ 1.6
CCT6AP40227 AC009086.3-201ENST00000623486 1008 ntBASIC25.02■■□□□ 1.6
CCT6AP40227 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CCT6AP40227 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
CCT6AP40227 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC25.01■■□□□ 1.59
CCT6AP40227 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC25.01■■□□□ 1.59
CCT6AP40227 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
CCT6AP40227 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
CCT6AP40227 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC25.01■■□□□ 1.59
CCT6AP40227 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CCT6AP40227 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CCT6AP40227 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC25.01■■□□□ 1.59
CCT6AP40227 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CCT6AP40227 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC25■■□□□ 1.59
CCT6AP40227 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CCT6AP40227 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CCT6AP40227 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC25■■□□□ 1.59
CCT6AP40227 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC25■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms