Protein–RNA interactions for Protein: P35443

THBS4, Thrombospondin-4, humanhuman

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS4P35443 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
THBS4P35443 AC009102.2-201ENST00000606772 1639 ntBASIC19.51■□□□□ 0.71
THBS4P35443 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
THBS4P35443 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.5■□□□□ 0.71
THBS4P35443 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
THBS4P35443 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
THBS4P35443 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
THBS4P35443 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
THBS4P35443 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.5■□□□□ 0.71
THBS4P35443 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
THBS4P35443 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
THBS4P35443 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
THBS4P35443 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.5■□□□□ 0.71
THBS4P35443 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.49■□□□□ 0.71
THBS4P35443 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
THBS4P35443 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
THBS4P35443 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
THBS4P35443 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
THBS4P35443 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
THBS4P35443 AC096631.2-201ENST00000436136 790 ntBASIC19.49■□□□□ 0.71
THBS4P35443 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
THBS4P35443 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
THBS4P35443 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
THBS4P35443 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
THBS4P35443 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.49■□□□□ 0.71
THBS4P35443 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
THBS4P35443 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
THBS4P35443 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
THBS4P35443 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
THBS4P35443 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
THBS4P35443 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
THBS4P35443 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.48■□□□□ 0.71
THBS4P35443 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.48■□□□□ 0.71
THBS4P35443 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.48■□□□□ 0.71
THBS4P35443 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
THBS4P35443 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.48■□□□□ 0.71
THBS4P35443 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
THBS4P35443 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
THBS4P35443 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.47■□□□□ 0.71
THBS4P35443 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
THBS4P35443 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
THBS4P35443 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.47■□□□□ 0.71
THBS4P35443 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.47■□□□□ 0.71
THBS4P35443 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC19.47■□□□□ 0.71
THBS4P35443 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.47■□□□□ 0.71
THBS4P35443 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.47■□□□□ 0.71
THBS4P35443 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.47■□□□□ 0.71
THBS4P35443 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
THBS4P35443 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
THBS4P35443 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
THBS4P35443 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
THBS4P35443 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
THBS4P35443 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.46■□□□□ 0.71
THBS4P35443 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.46■□□□□ 0.71
THBS4P35443 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
THBS4P35443 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.46■□□□□ 0.71
THBS4P35443 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
THBS4P35443 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
THBS4P35443 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
THBS4P35443 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
THBS4P35443 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.46■□□□□ 0.71
THBS4P35443 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
THBS4P35443 AL139246.5-201ENST00000606645 996 ntBASIC19.46■□□□□ 0.71
THBS4P35443 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.46■□□□□ 0.71
THBS4P35443 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.46■□□□□ 0.71
THBS4P35443 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
THBS4P35443 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
THBS4P35443 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
THBS4P35443 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
THBS4P35443 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
THBS4P35443 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.45■□□□□ 0.7
THBS4P35443 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
THBS4P35443 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
THBS4P35443 AC110285.6-201ENST00000617652 491 ntBASIC19.45■□□□□ 0.7
THBS4P35443 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
THBS4P35443 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
THBS4P35443 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
THBS4P35443 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
THBS4P35443 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
THBS4P35443 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
THBS4P35443 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
THBS4P35443 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
THBS4P35443 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
THBS4P35443 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.44■□□□□ 0.7
THBS4P35443 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
THBS4P35443 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
THBS4P35443 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
THBS4P35443 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
THBS4P35443 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
THBS4P35443 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
THBS4P35443 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
THBS4P35443 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
THBS4P35443 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
THBS4P35443 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.43■□□□□ 0.7
THBS4P35443 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
THBS4P35443 AL117328.2-201ENST00000624617 1940 ntBASIC19.43■□□□□ 0.7
THBS4P35443 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
THBS4P35443 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
THBS4P35443 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
THBS4P35443 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms