Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC27.72■■■□□ 2.03
KCNA3P22001 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC27.72■■■□□ 2.03
KCNA3P22001 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
KCNA3P22001 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC27.72■■■□□ 2.03
KCNA3P22001 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
KCNA3P22001 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
KCNA3P22001 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
KCNA3P22001 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC27.72■■■□□ 2.03
KCNA3P22001 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC27.72■■■□□ 2.03
KCNA3P22001 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC27.72■■■□□ 2.03
KCNA3P22001 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
KCNA3P22001 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
KCNA3P22001 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC27.71■■■□□ 2.03
KCNA3P22001 HLA-L-211ENST00000482052 1765 ntBASIC27.71■■■□□ 2.03
KCNA3P22001 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
KCNA3P22001 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC27.71■■■□□ 2.03
KCNA3P22001 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC27.71■■■□□ 2.03
KCNA3P22001 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC27.71■■■□□ 2.03
KCNA3P22001 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC27.71■■■□□ 2.03
KCNA3P22001 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
KCNA3P22001 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC27.7■■■□□ 2.03
KCNA3P22001 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
KCNA3P22001 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC27.7■■■□□ 2.02
KCNA3P22001 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC27.7■■■□□ 2.02
KCNA3P22001 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC27.7■■■□□ 2.02
KCNA3P22001 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
KCNA3P22001 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC27.7■■■□□ 2.02
KCNA3P22001 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
KCNA3P22001 STX4-202ENST00000394998 1498 ntTSL 2 BASIC27.7■■■□□ 2.02
KCNA3P22001 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC27.69■■■□□ 2.02
KCNA3P22001 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
KCNA3P22001 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
KCNA3P22001 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
KCNA3P22001 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC27.69■■■□□ 2.02
KCNA3P22001 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
KCNA3P22001 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC27.69■■■□□ 2.02
KCNA3P22001 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC27.69■■■□□ 2.02
KCNA3P22001 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
KCNA3P22001 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC27.69■■■□□ 2.02
KCNA3P22001 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
KCNA3P22001 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
KCNA3P22001 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC27.68■■■□□ 2.02
KCNA3P22001 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
KCNA3P22001 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
KCNA3P22001 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC27.68■■■□□ 2.02
KCNA3P22001 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC27.67■■■□□ 2.02
KCNA3P22001 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC27.67■■■□□ 2.02
KCNA3P22001 RARA-203ENST00000394086 2008 ntTSL 2 BASIC27.67■■■□□ 2.02
KCNA3P22001 KRT19P1-201ENST00000405746 1186 ntBASIC27.67■■■□□ 2.02
KCNA3P22001 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC27.67■■■□□ 2.02
KCNA3P22001 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
KCNA3P22001 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC27.67■■■□□ 2.02
KCNA3P22001 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC27.67■■■□□ 2.02
KCNA3P22001 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC27.67■■■□□ 2.02
KCNA3P22001 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
KCNA3P22001 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC27.66■■■□□ 2.02
KCNA3P22001 FP325331.1-202ENST00000623531 1380 ntBASIC27.66■■■□□ 2.02
KCNA3P22001 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
KCNA3P22001 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC27.66■■■□□ 2.02
KCNA3P22001 KRT18P6-201ENST00000555540 1265 ntBASIC27.66■■■□□ 2.02
KCNA3P22001 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC27.66■■■□□ 2.02
KCNA3P22001 AL050303.2-201ENST00000619798 666 ntBASIC27.66■■■□□ 2.02
KCNA3P22001 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
KCNA3P22001 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
KCNA3P22001 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC27.65■■■□□ 2.02
KCNA3P22001 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
KCNA3P22001 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC27.65■■■□□ 2.02
KCNA3P22001 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
KCNA3P22001 SPI1-203ENST00000533030 661 ntTSL 2 BASIC27.65■■■□□ 2.02
KCNA3P22001 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC27.65■■■□□ 2.02
KCNA3P22001 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC27.65■■■□□ 2.02
KCNA3P22001 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
KCNA3P22001 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
KCNA3P22001 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
KCNA3P22001 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
KCNA3P22001 KLF13-207ENST00000560473 489 ntTSL 3 BASIC27.64■■■□□ 2.02
KCNA3P22001 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC27.64■■■□□ 2.02
KCNA3P22001 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
KCNA3P22001 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC27.64■■■□□ 2.01
KCNA3P22001 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC27.63■■■□□ 2.01
KCNA3P22001 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
KCNA3P22001 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC27.63■■■□□ 2.01
KCNA3P22001 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
KCNA3P22001 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
KCNA3P22001 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
KCNA3P22001 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC27.63■■■□□ 2.01
KCNA3P22001 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC27.63■■■□□ 2.01
KCNA3P22001 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
KCNA3P22001 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC27.62■■■□□ 2.01
KCNA3P22001 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
KCNA3P22001 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
KCNA3P22001 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
KCNA3P22001 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC27.62■■■□□ 2.01
KCNA3P22001 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
KCNA3P22001 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC27.62■■■□□ 2.01
KCNA3P22001 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC27.62■■■□□ 2.01
KCNA3P22001 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC27.62■■■□□ 2.01
KCNA3P22001 GUSBP6-202ENST00000438529 1198 ntBASIC27.62■■■□□ 2.01
KCNA3P22001 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC27.62■■■□□ 2.01
KCNA3P22001 MIR4651-201ENST00000582622 73 ntBASIC27.62■■■□□ 2.01
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms