Protein–RNA interactions for Protein: P0DKX4

SMIM18, Small integral membrane protein 18, humanhuman

Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM18P0DKX4 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
SMIM18P0DKX4 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SMIM18P0DKX4 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
SMIM18P0DKX4 AF106564.1-201ENST00000607058 2553 ntBASIC20.37■□□□□ 0.85
SMIM18P0DKX4 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SMIM18P0DKX4 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMIM18P0DKX4 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMIM18P0DKX4 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.36■□□□□ 0.85
SMIM18P0DKX4 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMIM18P0DKX4 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.36■□□□□ 0.85
SMIM18P0DKX4 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC20.36■□□□□ 0.85
SMIM18P0DKX4 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMIM18P0DKX4 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SMIM18P0DKX4 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
SMIM18P0DKX4 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.36■□□□□ 0.85
SMIM18P0DKX4 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMIM18P0DKX4 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC20.36■□□□□ 0.85
SMIM18P0DKX4 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMIM18P0DKX4 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
SMIM18P0DKX4 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
SMIM18P0DKX4 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SMIM18P0DKX4 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMIM18P0DKX4 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.35■□□□□ 0.85
SMIM18P0DKX4 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.35■□□□□ 0.85
SMIM18P0DKX4 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMIM18P0DKX4 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMIM18P0DKX4 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMIM18P0DKX4 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.35■□□□□ 0.85
SMIM18P0DKX4 MIR3665-201ENST00000578708 105 ntBASIC20.35■□□□□ 0.85
SMIM18P0DKX4 CHML-204ENST00000638121 920 ntTSL 2 BASIC20.35■□□□□ 0.85
SMIM18P0DKX4 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMIM18P0DKX4 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMIM18P0DKX4 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.35■□□□□ 0.85
SMIM18P0DKX4 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SMIM18P0DKX4 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.35■□□□□ 0.85
SMIM18P0DKX4 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMIM18P0DKX4 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SMIM18P0DKX4 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SMIM18P0DKX4 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.34■□□□□ 0.85
SMIM18P0DKX4 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.34■□□□□ 0.85
SMIM18P0DKX4 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SMIM18P0DKX4 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SMIM18P0DKX4 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.34■□□□□ 0.85
SMIM18P0DKX4 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.34■□□□□ 0.85
SMIM18P0DKX4 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SMIM18P0DKX4 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SMIM18P0DKX4 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SMIM18P0DKX4 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SMIM18P0DKX4 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SMIM18P0DKX4 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SMIM18P0DKX4 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SMIM18P0DKX4 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SMIM18P0DKX4 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SMIM18P0DKX4 AC244015.2-201ENST00000616358 1861 ntBASIC20.33■□□□□ 0.84
SMIM18P0DKX4 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMIM18P0DKX4 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMIM18P0DKX4 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.32■□□□□ 0.84
SMIM18P0DKX4 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMIM18P0DKX4 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMIM18P0DKX4 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.32■□□□□ 0.84
SMIM18P0DKX4 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMIM18P0DKX4 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMIM18P0DKX4 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMIM18P0DKX4 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SMIM18P0DKX4 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SMIM18P0DKX4 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
SMIM18P0DKX4 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMIM18P0DKX4 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.32■□□□□ 0.84
SMIM18P0DKX4 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMIM18P0DKX4 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
SMIM18P0DKX4 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMIM18P0DKX4 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SMIM18P0DKX4 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SMIM18P0DKX4 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SMIM18P0DKX4 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
SMIM18P0DKX4 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SMIM18P0DKX4 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.31■□□□□ 0.84
SMIM18P0DKX4 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SMIM18P0DKX4 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SMIM18P0DKX4 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SMIM18P0DKX4 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
SMIM18P0DKX4 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SMIM18P0DKX4 LINC01006-201ENST00000333319 2292 ntBASIC20.3■□□□□ 0.84
SMIM18P0DKX4 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMIM18P0DKX4 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.3■□□□□ 0.84
SMIM18P0DKX4 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMIM18P0DKX4 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMIM18P0DKX4 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC20.3■□□□□ 0.84
SMIM18P0DKX4 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC20.3■□□□□ 0.84
SMIM18P0DKX4 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMIM18P0DKX4 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SMIM18P0DKX4 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SMIM18P0DKX4 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMIM18P0DKX4 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMIM18P0DKX4 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SMIM18P0DKX4 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SMIM18P0DKX4 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SMIM18P0DKX4 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMIM18P0DKX4 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMIM18P0DKX4 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms