Protein–RNA interactions for Protein: O75486

SUPT3H, Transcription initiation protein SPT3 homolog, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT3HO75486 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.92■■□□□ 1.1
SUPT3HO75486 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SUPT3HO75486 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
SUPT3HO75486 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SUPT3HO75486 AC005703.6-201ENST00000623265 1329 ntBASIC21.92■■□□□ 1.1
SUPT3HO75486 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.92■■□□□ 1.1
SUPT3HO75486 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
SUPT3HO75486 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.92■■□□□ 1.1
SUPT3HO75486 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
SUPT3HO75486 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
SUPT3HO75486 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
SUPT3HO75486 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
SUPT3HO75486 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
SUPT3HO75486 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SUPT3HO75486 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SUPT3HO75486 MIR6722-201ENST00000617286 78 ntBASIC21.91■■□□□ 1.1
SUPT3HO75486 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SUPT3HO75486 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.9■■□□□ 1.1
SUPT3HO75486 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SUPT3HO75486 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
SUPT3HO75486 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.9■■□□□ 1.1
SUPT3HO75486 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
SUPT3HO75486 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SUPT3HO75486 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.9■■□□□ 1.1
SUPT3HO75486 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
SUPT3HO75486 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
SUPT3HO75486 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
SUPT3HO75486 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SUPT3HO75486 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.9■■□□□ 1.1
SUPT3HO75486 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
SUPT3HO75486 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
SUPT3HO75486 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
SUPT3HO75486 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
SUPT3HO75486 RARRES2P1-201ENST00000474487 481 ntBASIC21.89■■□□□ 1.09
SUPT3HO75486 KRT125P-201ENST00000546827 989 ntBASIC21.89■■□□□ 1.09
SUPT3HO75486 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.89■■□□□ 1.09
SUPT3HO75486 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
SUPT3HO75486 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
SUPT3HO75486 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SUPT3HO75486 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SUPT3HO75486 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.89■■□□□ 1.09
SUPT3HO75486 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SUPT3HO75486 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.89■■□□□ 1.09
SUPT3HO75486 AC144652.1-201ENST00000609974 1624 ntBASIC21.88■■□□□ 1.09
SUPT3HO75486 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SUPT3HO75486 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SUPT3HO75486 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
SUPT3HO75486 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SUPT3HO75486 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SUPT3HO75486 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.88■■□□□ 1.09
SUPT3HO75486 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
SUPT3HO75486 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
SUPT3HO75486 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SUPT3HO75486 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SUPT3HO75486 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SUPT3HO75486 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
SUPT3HO75486 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.87■■□□□ 1.09
SUPT3HO75486 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SUPT3HO75486 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.87■■□□□ 1.09
SUPT3HO75486 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SUPT3HO75486 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.87■■□□□ 1.09
SUPT3HO75486 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
SUPT3HO75486 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
SUPT3HO75486 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
SUPT3HO75486 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SUPT3HO75486 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SUPT3HO75486 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.86■■□□□ 1.09
SUPT3HO75486 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.86■■□□□ 1.09
SUPT3HO75486 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.86■■□□□ 1.09
SUPT3HO75486 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.86■■□□□ 1.09
SUPT3HO75486 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SUPT3HO75486 AC092028.1-203ENST00000608262 953 ntBASIC21.86■■□□□ 1.09
SUPT3HO75486 GUSBP5-202ENST00000510805 1989 ntBASIC21.86■■□□□ 1.09
SUPT3HO75486 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SUPT3HO75486 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.86■■□□□ 1.09
SUPT3HO75486 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
SUPT3HO75486 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
SUPT3HO75486 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
SUPT3HO75486 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.85■■□□□ 1.09
SUPT3HO75486 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.85■■□□□ 1.09
SUPT3HO75486 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
SUPT3HO75486 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.85■■□□□ 1.09
SUPT3HO75486 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
SUPT3HO75486 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.85■■□□□ 1.09
SUPT3HO75486 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SUPT3HO75486 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SUPT3HO75486 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SUPT3HO75486 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SUPT3HO75486 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SUPT3HO75486 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SUPT3HO75486 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.84■■□□□ 1.09
SUPT3HO75486 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.84■■□□□ 1.09
SUPT3HO75486 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
SUPT3HO75486 Z92544.1-202ENST00000571933 1220 ntBASIC21.84■■□□□ 1.09
SUPT3HO75486 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SUPT3HO75486 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.84■■□□□ 1.09
SUPT3HO75486 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
SUPT3HO75486 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SUPT3HO75486 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SUPT3HO75486 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms