Protein–RNA interactions for Protein: O15439

ABCC4, Multidrug resistance-associated protein 4, humanhuman

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4O15439 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC28.46■■■□□ 2.15
ABCC4O15439 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC28.46■■■□□ 2.15
ABCC4O15439 RASA4CP-201ENST00000424092 1398 ntBASIC28.45■■■□□ 2.15
ABCC4O15439 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC28.45■■■□□ 2.15
ABCC4O15439 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
ABCC4O15439 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC28.45■■■□□ 2.15
ABCC4O15439 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
ABCC4O15439 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC28.45■■■□□ 2.14
ABCC4O15439 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC28.45■■■□□ 2.14
ABCC4O15439 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
ABCC4O15439 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC28.45■■■□□ 2.14
ABCC4O15439 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC28.45■■■□□ 2.14
ABCC4O15439 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC28.44■■■□□ 2.14
ABCC4O15439 AC011298.3-201ENST00000615796 283 ntBASIC28.44■■■□□ 2.14
ABCC4O15439 MIR6821-201ENST00000617625 74 ntBASIC28.44■■■□□ 2.14
ABCC4O15439 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
ABCC4O15439 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC28.44■■■□□ 2.14
ABCC4O15439 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC28.44■■■□□ 2.14
ABCC4O15439 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC28.44■■■□□ 2.14
ABCC4O15439 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC28.44■■■□□ 2.14
ABCC4O15439 AC027682.1-201ENST00000562846 899 ntBASIC28.43■■■□□ 2.14
ABCC4O15439 ANKRD20A6P-201ENST00000618763 204 ntBASIC28.43■■■□□ 2.14
ABCC4O15439 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC28.43■■■□□ 2.14
ABCC4O15439 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
ABCC4O15439 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
ABCC4O15439 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC28.43■■■□□ 2.14
ABCC4O15439 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
ABCC4O15439 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC28.43■■■□□ 2.14
ABCC4O15439 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC28.43■■■□□ 2.14
ABCC4O15439 AL138724.1-201ENST00000606771 1088 ntBASIC28.43■■■□□ 2.14
ABCC4O15439 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
ABCC4O15439 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
ABCC4O15439 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
ABCC4O15439 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC28.42■■■□□ 2.14
ABCC4O15439 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC28.42■■■□□ 2.14
ABCC4O15439 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
ABCC4O15439 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC28.42■■■□□ 2.14
ABCC4O15439 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
ABCC4O15439 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC28.41■■■□□ 2.14
ABCC4O15439 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
ABCC4O15439 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
ABCC4O15439 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC28.41■■■□□ 2.14
ABCC4O15439 AL353803.4-201ENST00000565882 1934 ntBASIC28.41■■■□□ 2.14
ABCC4O15439 AC097381.1-201ENST00000429019 1296 ntBASIC28.41■■■□□ 2.14
ABCC4O15439 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
ABCC4O15439 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC28.41■■■□□ 2.14
ABCC4O15439 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
ABCC4O15439 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC28.4■■■□□ 2.14
ABCC4O15439 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
ABCC4O15439 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC28.4■■■□□ 2.14
ABCC4O15439 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC28.4■■■□□ 2.14
ABCC4O15439 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC28.4■■■□□ 2.14
ABCC4O15439 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
ABCC4O15439 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
ABCC4O15439 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
ABCC4O15439 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC28.4■■■□□ 2.14
ABCC4O15439 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC28.4■■■□□ 2.14
ABCC4O15439 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC28.4■■■□□ 2.14
ABCC4O15439 VGF-203ENST00000611537 1622 ntTSL 5 BASIC28.4■■■□□ 2.14
ABCC4O15439 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC28.39■■■□□ 2.14
ABCC4O15439 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC28.39■■■□□ 2.14
ABCC4O15439 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
ABCC4O15439 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
ABCC4O15439 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC28.39■■■□□ 2.13
ABCC4O15439 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC28.39■■■□□ 2.13
ABCC4O15439 AC006455.2-201ENST00000429931 906 ntBASIC28.39■■■□□ 2.13
ABCC4O15439 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC28.39■■■□□ 2.13
ABCC4O15439 AC008764.7-201ENST00000593779 1081 ntBASIC28.39■■■□□ 2.13
ABCC4O15439 AC087623.3-201ENST00000607047 1098 ntBASIC28.39■■■□□ 2.13
ABCC4O15439 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC28.39■■■□□ 2.13
ABCC4O15439 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC28.38■■■□□ 2.13
ABCC4O15439 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC28.38■■■□□ 2.13
ABCC4O15439 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC28.38■■■□□ 2.13
ABCC4O15439 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC28.38■■■□□ 2.13
ABCC4O15439 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
ABCC4O15439 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC28.38■■■□□ 2.13
ABCC4O15439 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC28.38■■■□□ 2.13
ABCC4O15439 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC28.38■■■□□ 2.13
ABCC4O15439 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC28.38■■■□□ 2.13
ABCC4O15439 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC28.38■■■□□ 2.13
ABCC4O15439 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
ABCC4O15439 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
ABCC4O15439 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC28.37■■■□□ 2.13
ABCC4O15439 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
ABCC4O15439 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC28.37■■■□□ 2.13
ABCC4O15439 AC099791.1-201ENST00000416440 715 ntBASIC28.37■■■□□ 2.13
ABCC4O15439 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC28.37■■■□□ 2.13
ABCC4O15439 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
ABCC4O15439 FP325331.1-202ENST00000623531 1380 ntBASIC28.37■■■□□ 2.13
ABCC4O15439 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC28.36■■■□□ 2.13
ABCC4O15439 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC28.36■■■□□ 2.13
ABCC4O15439 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC28.36■■■□□ 2.13
ABCC4O15439 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC28.36■■■□□ 2.13
ABCC4O15439 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
ABCC4O15439 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
ABCC4O15439 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
ABCC4O15439 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
ABCC4O15439 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
ABCC4O15439 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
ABCC4O15439 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC28.35■■■□□ 2.13
Retrieved 100 of 98,524 protein–RNA pairs in 12 ms