Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 AC010525.1-201ENST00000585559 441 ntBASIC28.81■■■□□ 2.2
CHL1O00533 MPST-208ENST00000628507 698 ntTSL 5 BASIC28.81■■■□□ 2.2
CHL1O00533 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC28.8■■■□□ 2.2
CHL1O00533 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
CHL1O00533 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC28.8■■■□□ 2.2
CHL1O00533 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC28.8■■■□□ 2.2
CHL1O00533 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
CHL1O00533 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC28.8■■■□□ 2.2
CHL1O00533 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC28.8■■■□□ 2.2
CHL1O00533 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC28.8■■■□□ 2.2
CHL1O00533 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC28.8■■■□□ 2.2
CHL1O00533 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
CHL1O00533 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC28.79■■■□□ 2.2
CHL1O00533 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC28.79■■■□□ 2.2
CHL1O00533 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC28.79■■■□□ 2.2
CHL1O00533 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
CHL1O00533 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC28.79■■■□□ 2.2
CHL1O00533 AC105265.2-201ENST00000467189 838 ntBASIC28.79■■■□□ 2.2
CHL1O00533 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC28.79■■■□□ 2.2
CHL1O00533 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC28.79■■■□□ 2.2
CHL1O00533 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC28.79■■■□□ 2.2
CHL1O00533 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC28.79■■■□□ 2.2
CHL1O00533 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC28.79■■■□□ 2.2
CHL1O00533 STX4-202ENST00000394998 1498 ntTSL 2 BASIC28.78■■■□□ 2.2
CHL1O00533 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC28.78■■■□□ 2.2
CHL1O00533 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC28.78■■■□□ 2.2
CHL1O00533 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC28.78■■■□□ 2.2
CHL1O00533 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC28.78■■■□□ 2.2
CHL1O00533 STOX2-205ENST00000513034 807 ntTSL 3 BASIC28.78■■■□□ 2.2
CHL1O00533 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC28.78■■■□□ 2.2
CHL1O00533 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC28.78■■■□□ 2.2
CHL1O00533 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC28.78■■■□□ 2.2
CHL1O00533 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
CHL1O00533 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC28.77■■■□□ 2.2
CHL1O00533 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC28.77■■■□□ 2.2
CHL1O00533 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC28.77■■■□□ 2.2
CHL1O00533 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC28.77■■■□□ 2.2
CHL1O00533 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
CHL1O00533 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
CHL1O00533 THRA-202ENST00000394121 2260 ntTSL 2 BASIC28.77■■■□□ 2.2
CHL1O00533 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC28.76■■■□□ 2.2
CHL1O00533 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC28.76■■■□□ 2.2
CHL1O00533 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC28.76■■■□□ 2.19
CHL1O00533 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
CHL1O00533 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
CHL1O00533 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
CHL1O00533 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC28.75■■■□□ 2.19
CHL1O00533 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC28.75■■■□□ 2.19
CHL1O00533 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
CHL1O00533 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
CHL1O00533 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC28.75■■■□□ 2.19
CHL1O00533 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC28.75■■■□□ 2.19
CHL1O00533 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC28.75■■■□□ 2.19
CHL1O00533 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
CHL1O00533 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC28.75■■■□□ 2.19
CHL1O00533 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC28.74■■■□□ 2.19
CHL1O00533 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC28.74■■■□□ 2.19
CHL1O00533 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
CHL1O00533 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
CHL1O00533 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC28.74■■■□□ 2.19
CHL1O00533 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC28.74■■■□□ 2.19
CHL1O00533 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
CHL1O00533 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC28.74■■■□□ 2.19
CHL1O00533 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC28.74■■■□□ 2.19
CHL1O00533 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC28.74■■■□□ 2.19
CHL1O00533 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC28.74■■■□□ 2.19
CHL1O00533 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC28.74■■■□□ 2.19
CHL1O00533 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC28.74■■■□□ 2.19
CHL1O00533 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC28.74■■■□□ 2.19
CHL1O00533 AC004687.1-201ENST00000579003 1625 ntBASIC28.73■■■□□ 2.19
CHL1O00533 GUK1-205ENST00000366722 850 ntTSL 3 BASIC28.73■■■□□ 2.19
CHL1O00533 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC28.73■■■□□ 2.19
CHL1O00533 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC28.73■■■□□ 2.19
CHL1O00533 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
CHL1O00533 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC28.72■■■□□ 2.19
CHL1O00533 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC28.72■■■□□ 2.19
CHL1O00533 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
CHL1O00533 RBM38-205ENST00000440234 686 ntTSL 2 BASIC28.72■■■□□ 2.19
CHL1O00533 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
CHL1O00533 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
CHL1O00533 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC28.72■■■□□ 2.19
CHL1O00533 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
CHL1O00533 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC28.71■■■□□ 2.19
CHL1O00533 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC28.71■■■□□ 2.19
CHL1O00533 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
CHL1O00533 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC28.71■■■□□ 2.19
CHL1O00533 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
CHL1O00533 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC28.71■■■□□ 2.19
CHL1O00533 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC28.71■■■□□ 2.19
CHL1O00533 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC28.71■■■□□ 2.19
CHL1O00533 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC28.71■■■□□ 2.19
CHL1O00533 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
CHL1O00533 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC28.7■■■□□ 2.19
CHL1O00533 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC28.7■■■□□ 2.19
CHL1O00533 DUSP8P3-201ENST00000399571 1760 ntBASIC28.7■■■□□ 2.19
CHL1O00533 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC28.7■■■□□ 2.19
CHL1O00533 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
CHL1O00533 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC28.7■■■□□ 2.19
CHL1O00533 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC28.7■■■□□ 2.18
CHL1O00533 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms