Protein–RNA interactions for Protein: O00241

SIRPB1, Signal-regulatory protein beta-1, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB1O00241 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SIRPB1O00241 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SIRPB1O00241 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SIRPB1O00241 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SIRPB1O00241 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC18.74■□□□□ 0.59
SIRPB1O00241 EXOG-217ENST00000630638 197 ntTSL 5 BASIC18.74■□□□□ 0.59
SIRPB1O00241 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SIRPB1O00241 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC18.74■□□□□ 0.59
SIRPB1O00241 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SIRPB1O00241 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
SIRPB1O00241 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC18.74■□□□□ 0.59
SIRPB1O00241 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
SIRPB1O00241 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SIRPB1O00241 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SIRPB1O00241 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SIRPB1O00241 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SIRPB1O00241 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SIRPB1O00241 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC18.73■□□□□ 0.59
SIRPB1O00241 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.73■□□□□ 0.59
SIRPB1O00241 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
SIRPB1O00241 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
SIRPB1O00241 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC18.73■□□□□ 0.59
SIRPB1O00241 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SIRPB1O00241 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SIRPB1O00241 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SIRPB1O00241 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC18.72■□□□□ 0.59
SIRPB1O00241 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SIRPB1O00241 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SIRPB1O00241 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SIRPB1O00241 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SIRPB1O00241 TFPT-201ENST00000391757 774 ntTSL 5 BASIC18.72■□□□□ 0.59
SIRPB1O00241 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SIRPB1O00241 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
SIRPB1O00241 CREM-229ENST00000474362 1030 ntTSL 2 BASIC18.72■□□□□ 0.59
SIRPB1O00241 UNC93B8-201ENST00000511903 705 ntBASIC18.72■□□□□ 0.59
SIRPB1O00241 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC18.72■□□□□ 0.59
SIRPB1O00241 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
SIRPB1O00241 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SIRPB1O00241 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SIRPB1O00241 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SIRPB1O00241 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SIRPB1O00241 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC18.71■□□□□ 0.59
SIRPB1O00241 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SIRPB1O00241 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC18.71■□□□□ 0.59
SIRPB1O00241 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SIRPB1O00241 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
SIRPB1O00241 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SIRPB1O00241 LSM4-201ENST00000252816 986 ntTSL 2 BASIC18.71■□□□□ 0.59
SIRPB1O00241 AL035685.1-201ENST00000636663 812 ntBASIC18.71■□□□□ 0.59
SIRPB1O00241 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SIRPB1O00241 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
SIRPB1O00241 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
SIRPB1O00241 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC18.7■□□□□ 0.58
SIRPB1O00241 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SIRPB1O00241 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SIRPB1O00241 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
SIRPB1O00241 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SIRPB1O00241 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
SIRPB1O00241 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SIRPB1O00241 OR2A1-AS1-204ENST00000470435 602 ntBASIC18.7■□□□□ 0.58
SIRPB1O00241 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SIRPB1O00241 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SIRPB1O00241 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SIRPB1O00241 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC18.69■□□□□ 0.58
SIRPB1O00241 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.69■□□□□ 0.58
SIRPB1O00241 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SIRPB1O00241 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SIRPB1O00241 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
SIRPB1O00241 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC18.69■□□□□ 0.58
SIRPB1O00241 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SIRPB1O00241 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
SIRPB1O00241 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
SIRPB1O00241 ASB1-202ENST00000409297 878 ntTSL 5 BASIC18.69■□□□□ 0.58
SIRPB1O00241 TERT-206ENST00000508104 2486 ntTSL 5 BASIC18.69■□□□□ 0.58
SIRPB1O00241 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
SIRPB1O00241 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SIRPB1O00241 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SIRPB1O00241 GCA-201ENST00000233612 1694 ntTSL 2 BASIC18.69■□□□□ 0.58
SIRPB1O00241 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SIRPB1O00241 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SIRPB1O00241 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SIRPB1O00241 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SIRPB1O00241 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
SIRPB1O00241 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SIRPB1O00241 AC009102.2-201ENST00000606772 1639 ntBASIC18.68■□□□□ 0.58
SIRPB1O00241 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC18.68■□□□□ 0.58
SIRPB1O00241 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
SIRPB1O00241 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
SIRPB1O00241 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC18.68■□□□□ 0.58
SIRPB1O00241 NKILA-201ENST00000613231 537 ntTSL 4 BASIC18.68■□□□□ 0.58
SIRPB1O00241 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SIRPB1O00241 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SIRPB1O00241 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SIRPB1O00241 LINC01529-204ENST00000636474 1715 ntBASIC18.68■□□□□ 0.58
SIRPB1O00241 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SIRPB1O00241 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SIRPB1O00241 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SIRPB1O00241 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
SIRPB1O00241 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SIRPB1O00241 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms