Protein–RNA interactions for Protein: A0A0B4J262

TRAV8-6, T-cell receptor alpha variable 8-6 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-6A0A0B4J262 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV8-6A0A0B4J262 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV8-6A0A0B4J262 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC16.24■□□□□ 0.19
TRAV8-6A0A0B4J262 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV8-6A0A0B4J262 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC16.24■□□□□ 0.19
TRAV8-6A0A0B4J262 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
TRAV8-6A0A0B4J262 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV8-6A0A0B4J262 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC16.23■□□□□ 0.19
TRAV8-6A0A0B4J262 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV8-6A0A0B4J262 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
TRAV8-6A0A0B4J262 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
TRAV8-6A0A0B4J262 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV8-6A0A0B4J262 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV8-6A0A0B4J262 MTX2-204ENST00000443241 799 ntTSL 3 BASIC16.23■□□□□ 0.19
TRAV8-6A0A0B4J262 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV8-6A0A0B4J262 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV8-6A0A0B4J262 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV8-6A0A0B4J262 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC16.23■□□□□ 0.19
TRAV8-6A0A0B4J262 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
TRAV8-6A0A0B4J262 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC16.23■□□□□ 0.19
TRAV8-6A0A0B4J262 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV8-6A0A0B4J262 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV8-6A0A0B4J262 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV8-6A0A0B4J262 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC16.22■□□□□ 0.19
TRAV8-6A0A0B4J262 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV8-6A0A0B4J262 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
TRAV8-6A0A0B4J262 AL592295.1-201ENST00000400984 884 ntBASIC16.22■□□□□ 0.19
TRAV8-6A0A0B4J262 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC16.22■□□□□ 0.19
TRAV8-6A0A0B4J262 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TRAV8-6A0A0B4J262 AL033527.3-201ENST00000566366 1196 ntBASIC16.22■□□□□ 0.19
TRAV8-6A0A0B4J262 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC16.22■□□□□ 0.19
TRAV8-6A0A0B4J262 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC16.22■□□□□ 0.19
TRAV8-6A0A0B4J262 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TRAV8-6A0A0B4J262 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV8-6A0A0B4J262 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
TRAV8-6A0A0B4J262 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV8-6A0A0B4J262 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC16.21■□□□□ 0.19
TRAV8-6A0A0B4J262 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV8-6A0A0B4J262 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
TRAV8-6A0A0B4J262 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV8-6A0A0B4J262 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC16.21■□□□□ 0.19
TRAV8-6A0A0B4J262 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC16.21■□□□□ 0.19
TRAV8-6A0A0B4J262 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
TRAV8-6A0A0B4J262 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV8-6A0A0B4J262 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
TRAV8-6A0A0B4J262 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.19
TRAV8-6A0A0B4J262 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV8-6A0A0B4J262 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC16.21■□□□□ 0.19
TRAV8-6A0A0B4J262 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC16.21■□□□□ 0.19
TRAV8-6A0A0B4J262 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC16.21■□□□□ 0.19
TRAV8-6A0A0B4J262 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV8-6A0A0B4J262 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV8-6A0A0B4J262 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV8-6A0A0B4J262 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV8-6A0A0B4J262 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV8-6A0A0B4J262 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV8-6A0A0B4J262 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV8-6A0A0B4J262 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV8-6A0A0B4J262 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TRAV8-6A0A0B4J262 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
TRAV8-6A0A0B4J262 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
TRAV8-6A0A0B4J262 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV8-6A0A0B4J262 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV8-6A0A0B4J262 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC16.2■□□□□ 0.18
TRAV8-6A0A0B4J262 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
TRAV8-6A0A0B4J262 SHD-204ENST00000599689 1729 ntTSL 5 BASIC16.2■□□□□ 0.18
TRAV8-6A0A0B4J262 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC16.2■□□□□ 0.18
TRAV8-6A0A0B4J262 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV8-6A0A0B4J262 GUK1-208ENST00000366728 842 ntTSL 2 BASIC16.2■□□□□ 0.18
TRAV8-6A0A0B4J262 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV8-6A0A0B4J262 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV8-6A0A0B4J262 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC16.2■□□□□ 0.18
TRAV8-6A0A0B4J262 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC16.2■□□□□ 0.18
TRAV8-6A0A0B4J262 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
TRAV8-6A0A0B4J262 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV8-6A0A0B4J262 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV8-6A0A0B4J262 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC16.2■□□□□ 0.18
TRAV8-6A0A0B4J262 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV8-6A0A0B4J262 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV8-6A0A0B4J262 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV8-6A0A0B4J262 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV8-6A0A0B4J262 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC16.19■□□□□ 0.18
TRAV8-6A0A0B4J262 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV8-6A0A0B4J262 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
TRAV8-6A0A0B4J262 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV8-6A0A0B4J262 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC16.19■□□□□ 0.18
TRAV8-6A0A0B4J262 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC16.19■□□□□ 0.18
TRAV8-6A0A0B4J262 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV8-6A0A0B4J262 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
TRAV8-6A0A0B4J262 LONRF2P2-201ENST00000439212 571 ntBASIC16.19■□□□□ 0.18
TRAV8-6A0A0B4J262 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC16.19■□□□□ 0.18
TRAV8-6A0A0B4J262 AC022616.5-201ENST00000518796 181 ntBASIC16.19■□□□□ 0.18
TRAV8-6A0A0B4J262 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC16.19■□□□□ 0.18
TRAV8-6A0A0B4J262 AC019171.1-201ENST00000601251 1056 ntBASIC16.19■□□□□ 0.18
TRAV8-6A0A0B4J262 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV8-6A0A0B4J262 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV8-6A0A0B4J262 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV8-6A0A0B4J262 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC16.19■□□□□ 0.18
TRAV8-6A0A0B4J262 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC16.19■□□□□ 0.18
TRAV8-6A0A0B4J262 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms