Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC15.46■□□□□ 0.07
TRAV8-4A0A0B4J246 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV8-4A0A0B4J246 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV8-4A0A0B4J246 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC15.46■□□□□ 0.07
TRAV8-4A0A0B4J246 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
TRAV8-4A0A0B4J246 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
TRAV8-4A0A0B4J246 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
TRAV8-4A0A0B4J246 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV8-4A0A0B4J246 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV8-4A0A0B4J246 BEX3-202ENST00000372634 753 ntTSL 2 BASIC15.45■□□□□ 0.06
TRAV8-4A0A0B4J246 YBX1P4-201ENST00000392794 808 ntBASIC15.45■□□□□ 0.06
TRAV8-4A0A0B4J246 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV8-4A0A0B4J246 LBH-205ENST00000407930 756 ntTSL 2 BASIC15.45■□□□□ 0.06
TRAV8-4A0A0B4J246 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC15.45■□□□□ 0.06
TRAV8-4A0A0B4J246 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC15.45■□□□□ 0.06
TRAV8-4A0A0B4J246 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
TRAV8-4A0A0B4J246 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV8-4A0A0B4J246 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
TRAV8-4A0A0B4J246 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV8-4A0A0B4J246 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV8-4A0A0B4J246 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV8-4A0A0B4J246 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV8-4A0A0B4J246 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC15.44■□□□□ 0.06
TRAV8-4A0A0B4J246 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV8-4A0A0B4J246 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV8-4A0A0B4J246 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV8-4A0A0B4J246 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
TRAV8-4A0A0B4J246 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV8-4A0A0B4J246 AL033527.3-201ENST00000566366 1196 ntBASIC15.44■□□□□ 0.06
TRAV8-4A0A0B4J246 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV8-4A0A0B4J246 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV8-4A0A0B4J246 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
TRAV8-4A0A0B4J246 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV8-4A0A0B4J246 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC15.44■□□□□ 0.06
TRAV8-4A0A0B4J246 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC15.43■□□□□ 0.06
TRAV8-4A0A0B4J246 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV8-4A0A0B4J246 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV8-4A0A0B4J246 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
TRAV8-4A0A0B4J246 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC15.43■□□□□ 0.06
TRAV8-4A0A0B4J246 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV8-4A0A0B4J246 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV8-4A0A0B4J246 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV8-4A0A0B4J246 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV8-4A0A0B4J246 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV8-4A0A0B4J246 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV8-4A0A0B4J246 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC15.43■□□□□ 0.06
TRAV8-4A0A0B4J246 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV8-4A0A0B4J246 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV8-4A0A0B4J246 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV8-4A0A0B4J246 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV8-4A0A0B4J246 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV8-4A0A0B4J246 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV8-4A0A0B4J246 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC15.42■□□□□ 0.06
TRAV8-4A0A0B4J246 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC15.42■□□□□ 0.06
TRAV8-4A0A0B4J246 MIR4281-201ENST00000580852 62 ntBASIC15.42■□□□□ 0.06
TRAV8-4A0A0B4J246 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV8-4A0A0B4J246 PVT1_1.1-201ENST00000615125 194 ntBASIC15.42■□□□□ 0.06
TRAV8-4A0A0B4J246 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV8-4A0A0B4J246 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
TRAV8-4A0A0B4J246 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC15.42■□□□□ 0.06
TRAV8-4A0A0B4J246 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
TRAV8-4A0A0B4J246 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV8-4A0A0B4J246 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV8-4A0A0B4J246 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV8-4A0A0B4J246 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV8-4A0A0B4J246 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV8-4A0A0B4J246 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV8-4A0A0B4J246 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC15.41■□□□□ 0.06
TRAV8-4A0A0B4J246 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV8-4A0A0B4J246 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV8-4A0A0B4J246 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC15.41■□□□□ 0.06
TRAV8-4A0A0B4J246 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC15.41■□□□□ 0.06
TRAV8-4A0A0B4J246 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC15.41■□□□□ 0.06
TRAV8-4A0A0B4J246 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
TRAV8-4A0A0B4J246 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV8-4A0A0B4J246 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC15.41■□□□□ 0.06
TRAV8-4A0A0B4J246 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC15.41■□□□□ 0.06
TRAV8-4A0A0B4J246 LSM7-203ENST00000585409 512 ntTSL 2 BASIC15.41■□□□□ 0.06
TRAV8-4A0A0B4J246 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC15.41■□□□□ 0.06
TRAV8-4A0A0B4J246 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
TRAV8-4A0A0B4J246 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV8-4A0A0B4J246 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV8-4A0A0B4J246 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV8-4A0A0B4J246 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
TRAV8-4A0A0B4J246 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV8-4A0A0B4J246 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
TRAV8-4A0A0B4J246 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC15.41■□□□□ 0.06
TRAV8-4A0A0B4J246 EP400NL-214ENST00000641289 2402 ntBASIC15.41■□□□□ 0.06
TRAV8-4A0A0B4J246 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV8-4A0A0B4J246 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV8-4A0A0B4J246 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV8-4A0A0B4J246 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC15.4■□□□□ 0.06
TRAV8-4A0A0B4J246 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC15.4■□□□□ 0.06
TRAV8-4A0A0B4J246 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV8-4A0A0B4J246 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC15.4■□□□□ 0.06
TRAV8-4A0A0B4J246 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV8-4A0A0B4J246 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC15.4■□□□□ 0.06
TRAV8-4A0A0B4J246 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV8-4A0A0B4J246 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV8-4A0A0B4J246 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms