Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 CSAG4-201ENST00000361201 755 ntTSL 2 BASIC20.2■□□□□ 0.82
RIMBP3Q9UFD9 AC246787.1-201ENST00000392301 627 ntBASIC20.2■□□□□ 0.82
RIMBP3Q9UFD9 AC073346.1-201ENST00000441928 651 ntTSL 3 BASIC20.2■□□□□ 0.82
RIMBP3Q9UFD9 VAMP7-203ENST00000460621 658 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RIMBP3Q9UFD9 AC010343.1-201ENST00000467270 629 ntBASIC20.2■□□□□ 0.82
RIMBP3Q9UFD9 CETN3-203ENST00000522083 1026 ntTSL 2 BASIC20.2■□□□□ 0.82
RIMBP3Q9UFD9 CETN3-204ENST00000522565 867 ntTSL 2 BASIC20.2■□□□□ 0.82
RIMBP3Q9UFD9 KRT128P-201ENST00000550729 663 ntBASIC20.2■□□□□ 0.82
RIMBP3Q9UFD9 AC007533.1-201ENST00000564739 870 ntTSL 3 BASIC20.2■□□□□ 0.82
RIMBP3Q9UFD9 CSAG4-202ENST00000583763 237 ntBASIC20.2■□□□□ 0.82
RIMBP3Q9UFD9 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RIMBP3Q9UFD9 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RIMBP3Q9UFD9 MEFV-209ENST00000541159 1888 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RIMBP3Q9UFD9 PMP22-203ENST00000395938 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RIMBP3Q9UFD9 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
RIMBP3Q9UFD9 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RIMBP3Q9UFD9 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC20.19■□□□□ 0.82
RIMBP3Q9UFD9 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RIMBP3Q9UFD9 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
RIMBP3Q9UFD9 IP6K2-219ENST00000446860 1565 ntTSL 2 BASIC20.19■□□□□ 0.82
RIMBP3Q9UFD9 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC20.19■□□□□ 0.82
RIMBP3Q9UFD9 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
RIMBP3Q9UFD9 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RIMBP3Q9UFD9 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC20.19■□□□□ 0.82
RIMBP3Q9UFD9 LRTM1-202ENST00000493075 1318 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RIMBP3Q9UFD9 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC20.19■□□□□ 0.82
RIMBP3Q9UFD9 AAAS-201ENST00000209873 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RIMBP3Q9UFD9 ENO4-203ENST00000409522 1840 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RIMBP3Q9UFD9 HNRNPA1P6-201ENST00000394002 1117 ntBASIC20.19■□□□□ 0.82
RIMBP3Q9UFD9 UQCC1-209ENST00000397556 1284 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RIMBP3Q9UFD9 AL023754.1-201ENST00000424696 863 ntTSL 2 BASIC20.19■□□□□ 0.82
RIMBP3Q9UFD9 HS1BP3-IT1-201ENST00000449391 600 ntTSL 2 BASIC20.19■□□□□ 0.82
RIMBP3Q9UFD9 CIPC-206ENST00000555611 599 ntTSL 4 BASIC20.19■□□□□ 0.82
RIMBP3Q9UFD9 ARL16-207ENST00000573392 869 ntTSL 3 BASIC20.19■□□□□ 0.82
RIMBP3Q9UFD9 AC024884.2-201ENST00000610448 1247 ntBASIC20.19■□□□□ 0.82
RIMBP3Q9UFD9 AP001059.2-201ENST00000620163 449 ntBASIC20.19■□□□□ 0.82
RIMBP3Q9UFD9 AL662791.5-202ENST00000623946 461 ntTSL 2 BASIC20.19■□□□□ 0.82
RIMBP3Q9UFD9 TCTN3-204ENST00000430368 1778 ntTSL 2 BASIC20.19■□□□□ 0.82
RIMBP3Q9UFD9 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.19■□□□□ 0.82
RIMBP3Q9UFD9 CICP14-201ENST00000629111 2732 ntBASIC20.19■□□□□ 0.82
RIMBP3Q9UFD9 AL162391.1-201ENST00000419853 2102 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RIMBP3Q9UFD9 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RIMBP3Q9UFD9 DTX2P1-201ENST00000425797 1633 ntBASIC20.19■□□□□ 0.82
RIMBP3Q9UFD9 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RIMBP3Q9UFD9 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RIMBP3Q9UFD9 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC20.19■□□□□ 0.82
RIMBP3Q9UFD9 ATL2-206ENST00000419554 2335 ntTSL 2 BASIC20.18■□□□□ 0.82
RIMBP3Q9UFD9 STAU2-214ENST00000521451 2712 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RIMBP3Q9UFD9 GPM6B-203ENST00000356942 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
RIMBP3Q9UFD9 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RIMBP3Q9UFD9 PPP2R2C-204ENST00000506140 1780 ntTSL 2 BASIC20.18■□□□□ 0.82
RIMBP3Q9UFD9 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RIMBP3Q9UFD9 NEDD1-202ENST00000411739 2490 ntTSL 2 BASIC20.18■□□□□ 0.82
RIMBP3Q9UFD9 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RIMBP3Q9UFD9 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
RIMBP3Q9UFD9 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC20.18■□□□□ 0.82
RIMBP3Q9UFD9 AC083873.1-201ENST00000421179 1099 ntBASIC20.18■□□□□ 0.82
RIMBP3Q9UFD9 B3GALT5-AS1-204ENST00000489821 1159 ntTSL 2 BASIC20.18■□□□□ 0.82
RIMBP3Q9UFD9 AC012574.1-201ENST00000523874 252 ntTSL 5 BASIC20.18■□□□□ 0.82
RIMBP3Q9UFD9 CR383656.9-201ENST00000546860 1178 ntBASIC20.18■□□□□ 0.82
RIMBP3Q9UFD9 AP000345.2-201ENST00000608615 1081 ntTSL 3 BASIC20.18■□□□□ 0.82
RIMBP3Q9UFD9 IGLV2-8-201ENST00000620395 517 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
RIMBP3Q9UFD9 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RIMBP3Q9UFD9 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
RIMBP3Q9UFD9 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC20.18■□□□□ 0.82
RIMBP3Q9UFD9 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC20.18■□□□□ 0.82
RIMBP3Q9UFD9 NDUFAF6-201ENST00000396111 1869 ntTSL 5 BASIC20.18■□□□□ 0.82
RIMBP3Q9UFD9 GOLGA8Q-201ENST00000562783 1899 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
RIMBP3Q9UFD9 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
RIMBP3Q9UFD9 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
RIMBP3Q9UFD9 AMHR2-204ENST00000550311 1787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RIMBP3Q9UFD9 OR6F1-203ENST00000641444 1698 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
RIMBP3Q9UFD9 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RIMBP3Q9UFD9 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RIMBP3Q9UFD9 PSMC4-201ENST00000157812 1591 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RIMBP3Q9UFD9 PTRH2-201ENST00000393038 901 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
RIMBP3Q9UFD9 CITED1-206ENST00000431381 941 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
RIMBP3Q9UFD9 AC106875.1-202ENST00000435175 1170 ntTSL 3 BASIC20.17■□□□□ 0.82
RIMBP3Q9UFD9 AC007952.3-203ENST00000439868 392 ntTSL 5 BASIC20.17■□□□□ 0.82
RIMBP3Q9UFD9 HYI-AS1-201ENST00000444386 545 ntTSL 2 BASIC20.17■□□□□ 0.82
RIMBP3Q9UFD9 CITED1-207ENST00000445983 820 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
RIMBP3Q9UFD9 AC106017.1-203ENST00000447506 392 ntTSL 5 BASIC20.17■□□□□ 0.82
RIMBP3Q9UFD9 ENY2-210ENST00000521662 562 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
RIMBP3Q9UFD9 AC011676.4-201ENST00000523604 413 ntTSL 3 BASIC20.17■□□□□ 0.82
RIMBP3Q9UFD9 AC012555.1-201ENST00000551650 674 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RIMBP3Q9UFD9 AL139317.1-201ENST00000554548 196 ntTSL 3 BASIC20.17■□□□□ 0.82
RIMBP3Q9UFD9 OAZ2-205ENST00000559753 785 ntTSL 2 BASIC20.17■□□□□ 0.82
RIMBP3Q9UFD9 AC016590.1-203ENST00000590889 547 ntTSL 2 BASIC20.17■□□□□ 0.82
RIMBP3Q9UFD9 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RIMBP3Q9UFD9 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RIMBP3Q9UFD9 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC20.17■□□□□ 0.82
RIMBP3Q9UFD9 ASB11-203ENST00000480796 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RIMBP3Q9UFD9 SHANK2-AS3-201ENST00000307548 1683 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RIMBP3Q9UFD9 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RIMBP3Q9UFD9 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC20.17■□□□□ 0.82
RIMBP3Q9UFD9 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
RIMBP3Q9UFD9 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RIMBP3Q9UFD9 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RIMBP3Q9UFD9 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC20.17■□□□□ 0.82
RIMBP3Q9UFD9 PTPN20-207ENST00000395725 2226 ntTSL 5 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 134.2 ms