Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 PTCH1-207ENST00000429896 6563 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TPM3P06753 COL11A1-210ENST00000512756 5442 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TPM3P06753 EFR3B-205ENST00000405108 2432 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TPM3P06753 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC15.32■□□□□ 0.04
TPM3P06753 DNMT3A-202ENST00000321117 4279 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TPM3P06753 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
TPM3P06753 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC15.32■□□□□ 0.04
TPM3P06753 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC15.32■□□□□ 0.04
TPM3P06753 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC15.32■□□□□ 0.04
TPM3P06753 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC15.32■□□□□ 0.04
TPM3P06753 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
TPM3P06753 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC15.32■□□□□ 0.04
TPM3P06753 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TPM3P06753 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC15.32■□□□□ 0.04
TPM3P06753 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC15.32■□□□□ 0.04
TPM3P06753 POLD4-211ENST00000539074 714 ntTSL 3 BASIC15.32■□□□□ 0.04
TPM3P06753 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC15.32■□□□□ 0.04
TPM3P06753 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC15.32■□□□□ 0.04
TPM3P06753 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC15.32■□□□□ 0.04
TPM3P06753 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
TPM3P06753 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC15.32■□□□□ 0.04
TPM3P06753 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC15.32■□□□□ 0.04
TPM3P06753 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TPM3P06753 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC15.32■□□□□ 0.04
TPM3P06753 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC15.32■□□□□ 0.04
TPM3P06753 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TPM3P06753 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
TPM3P06753 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC15.32■□□□□ 0.04
TPM3P06753 AP000346.4-201ENST00000614827 381 ntBASIC15.32■□□□□ 0.04
TPM3P06753 AC092299.1-201ENST00000632679 757 ntBASIC15.32■□□□□ 0.04
TPM3P06753 OR1I1-202ENST00000641398 5984 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
TPM3P06753 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
TPM3P06753 AEBP1-201ENST00000223357 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TPM3P06753 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC15.32■□□□□ 0.04
TPM3P06753 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
TPM3P06753 UMODL1-205ENST00000408910 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TPM3P06753 PISD-203ENST00000397500 2194 ntTSL 5 BASIC15.32■□□□□ 0.04
TPM3P06753 KCNIP3-201ENST00000295225 2940 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TPM3P06753 CHD1L-202ENST00000369258 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TPM3P06753 GK-203ENST00000378943 3707 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TPM3P06753 ILF3-201ENST00000250241 3035 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TPM3P06753 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TPM3P06753 LINC01649-202ENST00000634255 1743 ntTSL 5 BASIC15.31■□□□□ 0.04
TPM3P06753 HLA-E-201ENST00000376630 2601 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
TPM3P06753 API5-208ENST00000531273 1868 ntTSL 2 BASIC15.31■□□□□ 0.04
TPM3P06753 BANK1-202ENST00000428908 3044 ntTSL 5 BASIC15.31■□□□□ 0.04
TPM3P06753 EXOC7-207ENST00000411744 2031 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TPM3P06753 ZSCAN5B-202ENST00000586855 2059 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
TPM3P06753 GDPD5-204ENST00000526177 4150 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TPM3P06753 DLL1-201ENST00000366756 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TPM3P06753 NLRP7-201ENST00000328092 3299 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
TPM3P06753 PPP1R10-201ENST00000376511 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TPM3P06753 FOXN3-201ENST00000261302 2542 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
TPM3P06753 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TPM3P06753 GZMB-202ENST00000382540 816 ntTSL 5 BASIC15.31■□□□□ 0.04
TPM3P06753 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC15.31■□□□□ 0.04
TPM3P06753 AL512384.1-201ENST00000406683 331 ntBASIC15.31■□□□□ 0.04
TPM3P06753 AL354877.1-201ENST00000424412 413 ntBASIC15.31■□□□□ 0.04
TPM3P06753 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
TPM3P06753 WDR53-203ENST00000429115 683 ntTSL 2 BASIC15.31■□□□□ 0.04
TPM3P06753 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC15.31■□□□□ 0.04
TPM3P06753 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC15.31■□□□□ 0.04
TPM3P06753 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC15.31■□□□□ 0.04
TPM3P06753 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC15.31■□□□□ 0.04
TPM3P06753 AP000812.2-201ENST00000538934 718 ntBASIC15.31■□□□□ 0.04
TPM3P06753 CENPX-208ENST00000584347 799 ntTSL 2 BASIC15.31■□□□□ 0.04
TPM3P06753 AC008687.7-203ENST00000598442 551 ntTSL 4 BASIC15.31■□□□□ 0.04
TPM3P06753 DDX5-235ENST00000630471 473 ntTSL 4 BASIC15.31■□□□□ 0.04
TPM3P06753 PLEKHG2-203ENST00000425673 8132 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
TPM3P06753 HSPA12A-201ENST00000369209 5722 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TPM3P06753 STRA6-201ENST00000323940 2864 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TPM3P06753 ATG16L1-201ENST00000347464 2915 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TPM3P06753 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TPM3P06753 AC024560.1-201ENST00000424493 1471 ntTSL 3 BASIC15.31■□□□□ 0.04
TPM3P06753 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TPM3P06753 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC15.31■□□□□ 0.04
TPM3P06753 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TPM3P06753 EDARADD-202ENST00000359362 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TPM3P06753 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC15.31■□□□□ 0.04
TPM3P06753 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC15.31■□□□□ 0.04
TPM3P06753 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TPM3P06753 SEC14L1-204ENST00000436233 5295 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TPM3P06753 RABGAP1L-207ENST00000367690 1815 ntTSL 2 BASIC15.31■□□□□ 0.04
TPM3P06753 BEST1-208ENST00000534553 1829 ntTSL 2 BASIC15.31■□□□□ 0.04
TPM3P06753 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC15.31■□□□□ 0.04
TPM3P06753 AC020741.1-201ENST00000381217 2079 ntTSL 2 BASIC15.31■□□□□ 0.04
TPM3P06753 LRPPRC-201ENST00000260665 6335 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TPM3P06753 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TPM3P06753 NBN-203ENST00000409330 4523 ntTSL 5 BASIC15.31■□□□□ 0.04
TPM3P06753 NUTM2A-AS1-208ENST00000446751 2394 ntTSL 2 BASIC15.31■□□□□ 0.04
TPM3P06753 ASB7-201ENST00000332783 4985 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TPM3P06753 SLC5A11-201ENST00000347898 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TPM3P06753 DIDO1-202ENST00000354665 2707 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TPM3P06753 SLC26A6-203ENST00000358747 2729 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TPM3P06753 UBE2L3-204ENST00000545681 2932 ntTSL 2 BASIC15.3■□□□□ 0.04
TPM3P06753 FAM13B-203ENST00000425075 3098 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TPM3P06753 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TPM3P06753 RPS6KC1-209ENST00000615329 4022 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TPM3P06753 OTOF-203ENST00000339598 4756 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TPM3P06753 COL8A1-202ENST00000273342 3029 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms