Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 NFATC1-203ENST00000329101 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CLDN22Q8N7P3 TMPRSS4-213ENST00000522824 2052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CLDN22Q8N7P3 DCAF13-201ENST00000297579 2642 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CLDN22Q8N7P3 ZSCAN32-202ENST00000396846 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CLDN22Q8N7P3 LAS1L-201ENST00000374804 2261 ntTSL 2 BASIC12.45□□□□□ -0.42
CLDN22Q8N7P3 MPP4-203ENST00000396886 2250 ntTSL 2 BASIC12.45□□□□□ -0.42
CLDN22Q8N7P3 COX7A2L-202ENST00000378669 3056 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
CLDN22Q8N7P3 PRPF4-201ENST00000374198 2787 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
CLDN22Q8N7P3 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CLDN22Q8N7P3 LAIR1-204ENST00000391743 2735 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
CLDN22Q8N7P3 AL157791.1-201ENST00000553667 1699 ntBASIC12.45□□□□□ -0.42
CLDN22Q8N7P3 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CLDN22Q8N7P3 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CLDN22Q8N7P3 RASA4CP-203ENST00000446874 3193 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CLDN22Q8N7P3 MAN2C1-242ENST00000569482 3177 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CLDN22Q8N7P3 WDR66-202ENST00000397454 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CLDN22Q8N7P3 MAP7D2-202ENST00000379651 3930 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
CLDN22Q8N7P3 WDR92-201ENST00000295121 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CLDN22Q8N7P3 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC12.44□□□□□ -0.42
CLDN22Q8N7P3 SH2D3C-202ENST00000373276 3051 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CLDN22Q8N7P3 ZNF473-203ENST00000445728 2833 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
CLDN22Q8N7P3 ABCC4-206ENST00000536256 2840 ntTSL 2 BASIC12.44□□□□□ -0.42
CLDN22Q8N7P3 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC12.44□□□□□ -0.42
CLDN22Q8N7P3 AL513497.1-201ENST00000624273 2083 ntBASIC12.44□□□□□ -0.42
CLDN22Q8N7P3 KRT74-201ENST00000305620 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CLDN22Q8N7P3 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CLDN22Q8N7P3 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CLDN22Q8N7P3 GLIS3-202ENST00000381971 3961 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
CLDN22Q8N7P3 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC12.44□□□□□ -0.42
CLDN22Q8N7P3 ARHGEF1-203ENST00000354532 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CLDN22Q8N7P3 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CLDN22Q8N7P3 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CLDN22Q8N7P3 PTPRVP-205ENST00000641549 5067 ntBASIC12.44□□□□□ -0.42
CLDN22Q8N7P3 DNAJB12-202ENST00000394903 3198 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CLDN22Q8N7P3 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC12.44□□□□□ -0.42
CLDN22Q8N7P3 AC092902.2-210ENST00000468859 1996 ntTSL 2 BASIC12.44□□□□□ -0.42
CLDN22Q8N7P3 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CLDN22Q8N7P3 SDCCAG3P2-201ENST00000326105 1023 ntBASIC12.44□□□□□ -0.42
CLDN22Q8N7P3 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CLDN22Q8N7P3 AC239868.1-201ENST00000369385 493 ntBASIC12.44□□□□□ -0.42
CLDN22Q8N7P3 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
CLDN22Q8N7P3 C20orf141-201ENST00000380589 730 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CLDN22Q8N7P3 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
CLDN22Q8N7P3 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
CLDN22Q8N7P3 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
CLDN22Q8N7P3 CMC1-204ENST00000423894 549 ntTSL 2 BASIC12.44□□□□□ -0.42
CLDN22Q8N7P3 AL359979.2-201ENST00000435108 613 ntTSL 3 BASIC12.44□□□□□ -0.42
CLDN22Q8N7P3 AC006033.1-201ENST00000440505 426 ntBASIC12.44□□□□□ -0.42
CLDN22Q8N7P3 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC12.44□□□□□ -0.42
CLDN22Q8N7P3 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CLDN22Q8N7P3 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CLDN22Q8N7P3 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
CLDN22Q8N7P3 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CLDN22Q8N7P3 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC12.44□□□□□ -0.42
CLDN22Q8N7P3 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC12.44□□□□□ -0.42
CLDN22Q8N7P3 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC12.44□□□□□ -0.42
CLDN22Q8N7P3 LINC00969-321ENST00000629990 806 ntTSL 5 BASIC12.44□□□□□ -0.42
CLDN22Q8N7P3 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
CLDN22Q8N7P3 GPATCH2L-202ENST00000312858 2438 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
CLDN22Q8N7P3 TNFRSF21-201ENST00000296861 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CLDN22Q8N7P3 TRPM5-203ENST00000533060 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CLDN22Q8N7P3 TARS2-205ENST00000438568 2188 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CLDN22Q8N7P3 AC007336.3-201ENST00000623886 2160 ntBASIC12.44□□□□□ -0.42
CLDN22Q8N7P3 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
CLDN22Q8N7P3 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CLDN22Q8N7P3 PCDHB9-201ENST00000316105 4415 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
CLDN22Q8N7P3 AC104590.1-202ENST00000558368 1921 ntBASIC12.44□□□□□ -0.42
CLDN22Q8N7P3 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
CLDN22Q8N7P3 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CLDN22Q8N7P3 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CLDN22Q8N7P3 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CLDN22Q8N7P3 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CLDN22Q8N7P3 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
CLDN22Q8N7P3 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CLDN22Q8N7P3 KRT8P18-201ENST00000413425 1445 ntBASIC12.44□□□□□ -0.42
CLDN22Q8N7P3 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC12.44□□□□□ -0.42
CLDN22Q8N7P3 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CLDN22Q8N7P3 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC12.44□□□□□ -0.42
CLDN22Q8N7P3 EPHA1-201ENST00000275815 3363 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CLDN22Q8N7P3 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CLDN22Q8N7P3 TRIM35-201ENST00000305364 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CLDN22Q8N7P3 NUSAP1-208ENST00000559596 1629 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
CLDN22Q8N7P3 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CLDN22Q8N7P3 SLC26A8-202ENST00000394602 3144 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CLDN22Q8N7P3 NAA60-214ENST00000572584 2450 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CLDN22Q8N7P3 EFHD1-203ENST00000409708 1817 ntTSL 2 BASIC12.44□□□□□ -0.42
CLDN22Q8N7P3 BEST1-208ENST00000534553 1829 ntTSL 2 BASIC12.44□□□□□ -0.42
CLDN22Q8N7P3 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CLDN22Q8N7P3 GLO1-201ENST00000373365 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CLDN22Q8N7P3 SPCS3-201ENST00000503362 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CLDN22Q8N7P3 CYP24A1-203ENST00000395955 2227 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CLDN22Q8N7P3 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CLDN22Q8N7P3 AC005154.3-201ENST00000419639 1393 ntBASIC12.43□□□□□ -0.42
CLDN22Q8N7P3 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CLDN22Q8N7P3 L3MBTL1-203ENST00000373135 3218 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
CLDN22Q8N7P3 MSH6-214ENST00000616033 3429 ntTSL 5 BASIC12.43□□□□□ -0.42
CLDN22Q8N7P3 EEF2KMT-201ENST00000427587 2390 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
CLDN22Q8N7P3 AC010547.1-201ENST00000500612 2793 ntTSL 2 BASIC12.43□□□□□ -0.42
CLDN22Q8N7P3 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CLDN22Q8N7P3 PINX1-201ENST00000314787 1545 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms