Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC13.9□□□□□ -0.18
HACD3Q9P035 MIR3907-201ENST00000579424 151 ntBASIC13.9□□□□□ -0.18
HACD3Q9P035 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC13.9□□□□□ -0.18
HACD3Q9P035 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC13.9□□□□□ -0.18
HACD3Q9P035 AL359091.4-201ENST00000610052 409 ntBASIC13.9□□□□□ -0.18
HACD3Q9P035 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HACD3Q9P035 RCC2P5-201ENST00000492126 1487 ntBASIC13.9□□□□□ -0.18
HACD3Q9P035 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC13.9□□□□□ -0.18
HACD3Q9P035 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HACD3Q9P035 ADCY7-201ENST00000254235 6138 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HACD3Q9P035 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC13.9□□□□□ -0.18
HACD3Q9P035 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC13.9□□□□□ -0.18
HACD3Q9P035 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HACD3Q9P035 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
HACD3Q9P035 ZNF621-202ENST00000339296 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HACD3Q9P035 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
HACD3Q9P035 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HACD3Q9P035 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
HACD3Q9P035 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
HACD3Q9P035 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
HACD3Q9P035 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC13.9□□□□□ -0.19
HACD3Q9P035 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
HACD3Q9P035 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
HACD3Q9P035 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
HACD3Q9P035 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HACD3Q9P035 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC13.89□□□□□ -0.19
HACD3Q9P035 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
HACD3Q9P035 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HACD3Q9P035 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HACD3Q9P035 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HACD3Q9P035 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
HACD3Q9P035 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
HACD3Q9P035 SLC4A1-201ENST00000262418 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HACD3Q9P035 STX3-207ENST00000633708 3111 ntTSL 5 BASIC13.89□□□□□ -0.19
HACD3Q9P035 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
HACD3Q9P035 DDR1-225ENST00000376568 3894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
HACD3Q9P035 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
HACD3Q9P035 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
HACD3Q9P035 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
HACD3Q9P035 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HACD3Q9P035 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
HACD3Q9P035 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HACD3Q9P035 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HACD3Q9P035 TP73-203ENST00000357733 4899 ntTSL 5 BASIC13.89□□□□□ -0.19
HACD3Q9P035 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HACD3Q9P035 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HACD3Q9P035 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
HACD3Q9P035 HLA-DQB2-229ENST00000411527 1059 ntBASIC13.89□□□□□ -0.19
HACD3Q9P035 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC13.89□□□□□ -0.19
HACD3Q9P035 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HACD3Q9P035 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC13.89□□□□□ -0.19
HACD3Q9P035 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HACD3Q9P035 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC13.89□□□□□ -0.19
HACD3Q9P035 AC130709.1-201ENST00000484779 1212 ntBASIC13.89□□□□□ -0.19
HACD3Q9P035 TPI1-206ENST00000488464 791 ntTSL 5 BASIC13.89□□□□□ -0.19
HACD3Q9P035 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC13.89□□□□□ -0.19
HACD3Q9P035 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC13.89□□□□□ -0.19
HACD3Q9P035 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC13.89□□□□□ -0.19
HACD3Q9P035 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC13.89□□□□□ -0.19
HACD3Q9P035 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
HACD3Q9P035 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC13.89□□□□□ -0.19
HACD3Q9P035 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC13.89□□□□□ -0.19
HACD3Q9P035 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC13.89□□□□□ -0.19
HACD3Q9P035 GAS7-216ENST00000583882 553 ntTSL 5 BASIC13.89□□□□□ -0.19
HACD3Q9P035 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC13.89□□□□□ -0.19
HACD3Q9P035 SLC44A3-AS1-215ENST00000634870 5956 ntTSL 5 BASIC13.89□□□□□ -0.19
HACD3Q9P035 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
HACD3Q9P035 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HACD3Q9P035 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HACD3Q9P035 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HACD3Q9P035 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HACD3Q9P035 PRKCE-201ENST00000306156 5650 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HACD3Q9P035 MYO7A-205ENST00000458637 7336 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HACD3Q9P035 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
HACD3Q9P035 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HACD3Q9P035 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
HACD3Q9P035 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HACD3Q9P035 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
HACD3Q9P035 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HACD3Q9P035 SMAD2-203ENST00000402690 12075 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HACD3Q9P035 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HACD3Q9P035 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
HACD3Q9P035 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC13.88□□□□□ -0.19
HACD3Q9P035 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC13.88□□□□□ -0.19
HACD3Q9P035 AGAP12P-201ENST00000585227 2359 ntBASIC13.88□□□□□ -0.19
HACD3Q9P035 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HACD3Q9P035 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC13.88□□□□□ -0.19
HACD3Q9P035 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HACD3Q9P035 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC13.88□□□□□ -0.19
HACD3Q9P035 USP47-202ENST00000339865 7775 ntTSL 2 BASIC13.88□□□□□ -0.19
HACD3Q9P035 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC13.88□□□□□ -0.19
HACD3Q9P035 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC13.88□□□□□ -0.19
HACD3Q9P035 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC13.88□□□□□ -0.19
HACD3Q9P035 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HACD3Q9P035 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC13.88□□□□□ -0.19
HACD3Q9P035 MSNP1-201ENST00000511640 1732 ntBASIC13.88□□□□□ -0.19
HACD3Q9P035 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC13.88□□□□□ -0.19
HACD3Q9P035 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
HACD3Q9P035 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HACD3Q9P035 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms